Gene
RNA
| Item | Value |
|---|---|
| gene id | G1017381 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 75058002 ~ 75060231 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1157060 | True | 428 | lncRNA | 0.39 | 2 | 75058002 | 75060231 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536385 | suds3 | coding | upstream | 169737 | 74877456 ~ 74888265 (+) |
| LOC118937390 | NA | coding | upstream | 326854 | 74722874 ~ 74731148 (+) |
| pebp1 | pebp1 | coding | upstream | 346385 | 74707300 ~ 74711617 (+) |
| rfc5 | rfc5 | coding | upstream | 360387 | 74689455 ~ 74697615 (+) |
| LOC118937457 | NA | coding | upstream | 536956 | 74519385 ~ 74521046 (+) |
| LOC110536386 | LOC106579824 | coding | downstream | 93299 | 75153530 ~ 75274772 (+) |
| LOC110536389 | LOC106579825 | coding | downstream | 222325 | 75282556 ~ 75294050 (+) |
| LOC118937399 | NA | coding | downstream | 313868 | 75374099 ~ 75383293 (+) |
| trnaw-cca-7 | NA | coding | downstream | 318529 | 75378760 ~ 75378831 (+) |
| LOC110536393 | NA | coding | downstream | 806401 | 75866632 ~ 75878332 (+) |
| G1017300 | NA | non-coding | upstream | 166858 | 74890636 ~ 74891144 (+) |
| G1017059 | NA | non-coding | upstream | 266470 | 74785858 ~ 74791532 (+) |
| G1016991 | NA | non-coding | upstream | 304552 | 74688420 ~ 74753450 (+) |
| G1017024 | NA | non-coding | upstream | 328145 | 74729024 ~ 74729857 (+) |
| G1017006 | NA | non-coding | upstream | 400679 | 74651927 ~ 74657323 (+) |
| G1017524 | NA | non-coding | downstream | 66515 | 75126746 ~ 75126986 (+) |
| G1017529 | NA | non-coding | downstream | 75370 | 75135601 ~ 75136103 (+) |
| G1017533 | NA | non-coding | downstream | 84523 | 75144754 ~ 75145027 (+) |
| G1017541 | NA | non-coding | downstream | 98028 | 75158259 ~ 75158466 (+) |
| G1017546 | NA | non-coding | downstream | 103818 | 75164049 ~ 75164254 (+) |
| LOC110535110 | LOC106579812 | other | upstream | 1889560 | 73155366 ~ 73254792 (+) |
| G1014834 | NA | other | upstream | 2297057 | 72760521 ~ 72760945 (+) |
| G1013922 | NA | other | upstream | 3178330 | 71879296 ~ 71879672 (+) |
| G1013617 | NA | other | upstream | 3217532 | 71838302 ~ 71840882 (+) |
| LOC110536353 | LOC106580623 | other | upstream | 3260687 | 71738585 ~ 71797315 (+) |
| G1017593 | NA | other | downstream | 240107 | 75269723 ~ 75328737 (+) |
| LOC110536406 | LOC106570821 | other | downstream | 1428277 | 76396096 ~ 76600566 (+) |
| G1018678 | NA | other | downstream | 1463907 | 76524138 ~ 76525567 (+) |
| G1019189 | ptar1 | other | downstream | 1758274 | 76818505 ~ 76821968 (+) |
| mamdc2a | LOC106570826 | other | downstream | 1829496 | 76889699 ~ 76939449 (+) |
