XLOC_002914 (ypel2a)


Basic Information

Item Value
gene id XLOC_002914
gene name ypel2a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 35201850 ~ 35236949 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005395
TTGTATTGTGAGGCCCGATGCGCGACCGTGCAGTATTTACGGAGCGCTGCTGCTCTCGGTGTGCGTGGAAGATACCTGGAaactttgtgttgtgaagaatgATCACCTTTTGTTTTGCGTAAAGTCGCGGTTTTGAAGAAGAGGAGACATCAACCTGCGCGTCTTTTTCCATTCAAAGGTGTGCTCTCTTCTCTTCTGAAGCTTCACCACGGCCCTCACCTGTGTGCTCCACTGTTTCTCCTGCGAGTCATCCTGGGCTGATCGGCGCTTCCTGCTGCGCCCCCGCACCGTCTCTCCCGCCACTGTCGCCATGACCCGCTCCAAAACCTTTCAGGCCTATCTGCCCCACTGCCATCGCACATACAGCTGCATTCACTGCCGGGCGCACCTGGCCAACCACGACGAGCTCATCTCAAAGTCTTTTCAAGGGAGTCAAGGCAGGGCCTACCTCTTCAACTCAGTGGTGAATGTGGGCTGTGGTCCAGCAGAGGAGCGGGTCCTGCTGACGGGTCTGCACGCTGTGGCCGACATCTACTGTGAGAACTGTAAAACCACTCTGGGCTGGAAATATGAGCATGCCTTCGAAAGCAGTCAGAAGTACAAGGAGGGCAAATTCATCATCGAGCTGGCCCACATGATCAAGGACAACGGCTGGGACTGAAGAGCCTGAGCTCCCCGTGGCCCATAATGC
>TCONS_00005396
ATGACCCGCTCCAAAACCTTTCAGGCCTATCTGCCCCACTGCCATCGCACATACAGCTGCATTCACTGCCGGGCGCACCTGGCCAACCACGACGAGCTCATCTCAAAGTCTTTTCAAGGGAGTCAAGGCAGGGCCTACCTCTTCAACTCAGTGGTGAATGTGGGCTGTGGTCCAGCAGAGGAGCGGGTCCTGCTGACGGGTCTGCACGCTGTGGCCGACATCTACTGTGAGAACTGTAAAACCACTCTGGGCTGGAAATATGAGCATGCCTTCGAAAGCAGTCAGAAGTACAAGGAGGGCAAATTCATCATCGAGCTGGCCCACATGATCAAGGACAACGGCTGGGACTGA

Function

symbol description
ypel2a Predicted to enable metal ion binding activity. Orthologous to several human genes including YPEL2 (yippee like 2).

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-091118-98 Predicted to enable metal ion binding activity. Orthologous to several human genes including YPEL2 (yippee like 2).

Ensembl:

ensembl_id ENSDARG00000077224

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005395 False 691 mRNA 0.55 5 35201850 35236949
TCONS_00005396 True 351 mRNA 0.55 4 35201880 35220285

Neighbor

gene id symbol gene type direction distance location
XLOC_002913 pom121 coding downstream 15540 35169644 ~ 35186310 (-)
XLOC_002912 BX465844.1 coding downstream 37559 35160010 ~ 35164291 (-)
XLOC_002911 ripk4 coding downstream 48462 35114153 ~ 35153388 (-)
XLOC_002910 C10H21orf91 coding downstream 93167 35059856 ~ 35108683 (-)
XLOC_002909 NA coding downstream 143406 35054281 ~ 35058444 (-)
XLOC_002915 smg8 coding upstream 1539 35238488 ~ 35248502 (-)
XLOC_002916 prr11 coding upstream 13256 35250205 ~ 35257561 (-)
XLOC_002917 NA coding upstream 75943 35312892 ~ 35321637 (-)
XLOC_002918 gabrr3a coding upstream 130773 35367722 ~ 35410518 (-)
XLOC_002919 NA coding upstream 192555 35429504 ~ 35431655 (-)
XLOC_002906 CT573139.2 non-coding downstream 242672 34951060 ~ 34959178 (-)
XLOC_002902 BX510654.1 non-coding downstream 874456 34327262 ~ 34327394 (-)
XLOC_002900 NA non-coding downstream 1003284 34196782 ~ 34198566 (-)
XLOC_002922 BX663516.3 non-coding upstream 383384 35620333 ~ 35620449 (-)
XLOC_002923 NA non-coding upstream 413635 35650584 ~ 35654680 (-)
XLOC_002925 NA non-coding upstream 574803 35811752 ~ 36093533 (-)

Expression


Co-expression Network