antkmt (fam173a)


Basic Information

Item Value
gene id antkmt
gene name fam173a
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 59422836 ~ 59436071 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021624325.2
GCAGATCAACAATAGATTATGTACTGGTACAACGCATTAGCATACGGACTCATTCGTCCGGTCCGTCAAGGGTAAGATCCGTCCAAGGTTGCAGCTTGCCAGTATGGAAGAGGACAGTCCGGAAGAGTTTCTTGCAGAGTTCAAGGAGAAACATCTAGGTGCTTGGGGAATTGTCCAGATAACTGCTGGCACAGGGCTAGCTGTCTATGCCATGTGGGCAGGGGTTCTCATGCCGGGATTTCGAAAAGTCCCTCTGAGGTTACAGGTGCCCTATCTCCCCGCCAGCAAGAAACAAGTGCGGAATGTGATGGCACTGCTGAGTGGTCGACATGGTAACCTTGTGGACTTGGGCTCCGGTGATGGCAGGATTGTGCTGGAAGCACACAAACACGGCTTTGGTCCCACAGTAGGATACGAACTCAACCCCTGGTTAGTTTGTCTAGCTAACTTCCACGCATGGAGAGCAGGCCATTATGGGAAGGTGTCGTATCGGCAGGAAGACCTCTGGAAGGTGGACCTTACTGAGTGTAAGAATGTTACTGTGTTTTTGGCCCCCAGTGTGCTCTCTTTATTGCAGGAGAAGATGGAGGCTGAGCTTCCAGATGACGCCCTGGTCGTAGCCGGTAGGTTTCCCTTCACTGAGTGGACTCCATGCAGGATTGAAGGAGATGGTGTCGACAGAGCTTGGGCCTATACCATGCAGGCCCAAAGACTGCCAGCAGGGAGTGCTGTGCTACCTGTACCTAAAGAGTTGAAATCACCAGTTTGAACTGAAAGTGAGAGAACCAAGTAACTGTCTGGACCAGGAAGACATGAGACATAAGCATGAGCGTTTGTATGATGGAAGAAACAATTGGTTGTCTGAGGAGGAGGGACAAAACATTTTCATCTACATGGGTTGACACAAGTTGCTGACTGAGACCCACTCCTCACAGTGTTGAATTGGTAGTTAGGGACCTTTTCTCAATTGGATTTCCTCAATTCCTTGCCTCCGTCCTCTCCTTGCCTTTTGAAAACAACAGCTGTTTCAAAGGGGGTGTGGTTGATTTCAAAACTCTTCGTGATAGGAATTGAGAAAAGACCAGGGAGTGAGATGCCGTCTGAGTATATGAACCTGTCAACAGATAAACTACCAAGCACATGGTACAATCCAGACATCTTTAAAAACCATacctcttccacattttgttacgttacagccttattctaaaatggattaaataaaaacatgtcctcttcaa
>XM_036937909.1
GCAGATCAACAATAGATTATGTACTGGTACAACGCATTAGCATACGGACTCATTCGTCCGGTCCGTCAAGGGTAAGATCCGTCCAAGGTTGCAGCTTGCCAGTATGGAAGAGGACAGTCCGGAAGAGTTTCTTGCAGAGTTCAAGGAGAAACATCTAGGTGCTTGGGGAATTGTCCAGATAACTGCTGGCACAGGGCTAGCTGTCTATGCCATGTGGGCAGGGGTTCTCATGCCGGGATTTCGAAAAGTCCCTCTGAGGTTACAGGTGCTGGAAGCACACAAACACGGCTTTGGTCCCACAGTAGGATACGAACTCAACCCCTGGTTAGTTTGTCTAGCTAACTTCCACGCATGGAGAGCAGGCCATTATGGGAAGGTGTCGTATCGGCAGGAAGACCTCTGGAAGGTGGACCTTACTGAGTGTAAGAATGTTACTGTGTTTTTGGCCCCCAGTGTGCTCTCTTTATTGCAGGAGAAGATGGAGGCTGAGCTTCCAGATGACGCCCTGGTCGTAGCCGGTAGGTTTCCCTTCACTGAGTGGACTCCATGCAGGATTGAAGGAGATGGTGTCGACAGAGCTTGGGCCTATACCATGCAGGCCCAAAGACTGCCAGCAGGGAGTGCTGTGCTACCTGTACCTAAAGAGTTGAAATCACCAGTTTGAACTGAAAGTGAGAGAACCAAGTAACTGTCTGGACCAGGAAGACATGAGACATAAGCATGAGCGTTTGTATGATGGAAGAAACAATTGGTTGTCTGAGGAGGAGGGACAAAACATTTTCATCTACATGGGTTGACACAAGTTGCTGACTGAGACCCACTCCTCACAGTGTTGAATTGGTAGTTAGGGACCTTTTCTCAATTGGATTTCCTCAATTCCTTGCCTCCGTCCTCTCCTTGCCTTTTGAAAACAACAGCTGTTTCAAAGGGGGTGTGGTTGATTTCAAAACTCTTCGTGATAGGAATTGAGAAAAGACCAGGGAGTGAGATGCCGTCTGAGTATATGAACCTGTCAACAGATAAACTACCAAGCACATGGTACAATCCAGACATCTTTAAAAACCATacctcttccacattttgttacgttacagccttattctaaaatggattaaataaaaacatgtcctcttcaa

Function

NR:

description
protein FAM173A isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021624325.2 False 1241 mRNA 0.48 6 59422836 59436071
XM_036937909.1 True 1136 mRNA 0.47 5 59422836 59436071

Neighbor

gene id symbol gene type direction distance location
hirip3 hirip3 coding upstream 618 59398735 ~ 59422218 (+)
kctd13 LOC106600645 coding upstream 32909 59350779 ~ 59389927 (+)
sez6l2 sez6l2 coding upstream 79730 59233354 ~ 59343106 (+)
LOC110537871 LOC106604470 coding upstream 316830 59052329 ~ 59106006 (+)
LOC110537870 LOC100380866 coding upstream 447700 58961767 ~ 58975136 (+)
xpo6 LOC106600647 coding downstream 4160 59440231 ~ 59502350 (+)
nme4 LOC100301668 coding downstream 72497 59508568 ~ 59539373 (+)
ccdc137 ccdc137 coding downstream 110048 59546119 ~ 59558479 (+)
LOC118937690 NA coding downstream 160543 59596614 ~ 59598278 (+)
LOC110537890 NA coding downstream 163300 59599371 ~ 59611523 (+)
G1093874 NA non-coding upstream 209849 59211790 ~ 59212987 (+)
G1093823 NA non-coding upstream 279325 59143278 ~ 59143511 (+)
G1093820 NA non-coding upstream 290360 59132186 ~ 59132476 (+)
G1093810 NA non-coding upstream 303907 59118722 ~ 59118929 (+)
G1093719 NA non-coding upstream 435632 58986447 ~ 58987204 (+)
G1093974 NA non-coding downstream 67345 59503416 ~ 59503617 (+)
G1093979 NA non-coding downstream 79970 59516041 ~ 59516951 (+)
G1094003 NA non-coding downstream 141309 59577380 ~ 59577673 (+)
G1094009 NA non-coding downstream 150395 59586466 ~ 59587553 (+)
G1094010 amdhd2 non-coding downstream 155640 59591711 ~ 59593406 (+)
LOC118937686 NA other upstream 1200646 58216142 ~ 58222215 (+)
LOC110537841 mtmr4 other upstream 1508004 57893341 ~ 58071571 (+)
LOC110537831 dhx33 other upstream 2304909 57112902 ~ 57118165 (+)
G1091235 NA other upstream 2669889 56752418 ~ 56752947 (+)
G1091217 NA other upstream 2696833 56725607 ~ 56726003 (+)
G1093909 NA other downstream 105487 59541558 ~ 59542603 (+)
G1094218 LOC100380853 other downstream 594932 60031003 ~ 60034020 (+)
G1095244 LOC108238713 other downstream 949593 60385664 ~ 60385973 (+)
LOC110539079 LOC106600700 other downstream 1260616 60696612 ~ 60777061 (+)
G1095209 NA other downstream 1380420 60816491 ~ 60818897 (+)

Expression


Co-expression Network