LOC100136295 (LOC100136295)


Basic Information

Item Value
gene id LOC100136295
gene name LOC100136295
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 62440267 ~ 62442153 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124549.1
CTCTGCCTTCGTCCCGCGTTATCGAACATTCCGGGTTGATAACATATCACTGACTTGAACTATAATAGCAAAATAGTCTAAGAAACTCTATTTTTGTACTTTTCATTTCGATATAAAATAAAATCTGACGAGATGGAGTCTCAGATCCGCCAGAACTATCACCACGATTGCGAAGCTGCCATCAACCGGATGATCAACTTGGAGATGTTTGCCTCCTACACCTACACCTCAATGGCTTTCTATTTCTCCCGTGACGATGTGGCGCTGCGTGGCTTCGCGCATTTCTTCAAGGAGAACAGCGATGAGGAGCGGGAGCACGCCGACAAGCTACTCTCCTTCCAGAACAAGAGAGGTGGACGCATTTTACTCCAAGACATCAAGAAGCCAGAACGTGATGAGTGGGGCAATGGGCTGGAGGCCATGCAGTGTGCTCTGCAGCTGGAGAAGAATGTGAACCAGGCCCTGCTGGACCTGCACAAGATTGCCTCTGACAAGGTTGACCCCCATCTGTGTGACTTCCTGGAGACCCATTACCTGAATGAGCAGGTGGAGGCCATTAAGAAGCTGGGAGACCACATCACCAACCTCACCAAGATGGATGCTGTCAAAAACAAGATGGCAGAGTACCTGTTTGACAAGCACACCCTGGGAGGCCAGAGCTAAACCACTTCCATCCCCAGGCTACGGCCTCCAGCCTCAGACCAGGACTCCTGGCTTCTCTGATAGATCCTACTGGCTTTGCATTTATAGGGAGGGGAGTATTAAACTGGTGCAGTGCAACACAGCTGTAACATTGAGGTGTTTATGTTGACAACCCTACTGTATTGGAGGCAAGGCATCTTgtaaaacaataaaacatttcACTT

Function

NR:

description
ferritin H-3

GO: NA

KEGG:

id description
K00522 FTH1; ferritin heavy chain

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124549.1 True 866 mRNA 0.49 4 62440267 62442153

Neighbor

gene id symbol gene type direction distance location
LOC110515900 LOC100136295 coding upstream 4438 62433720 ~ 62443344 (+)
LOC110537942 LOC106600765 coding upstream 30083 62402689 ~ 62410184 (+)
LOC110537940 LOC106600765 coding upstream 41967 62392443 ~ 62398300 (+)
aldh16a1 aldh16a1 coding upstream 74753 62350796 ~ 62365514 (+)
kcnc3a LOC106600760 coding upstream 97328 62238004 ~ 62342939 (+)
LOC118937701 LOC100136295 coding downstream 4288 62441706 ~ 62448515 (+)
LOC110537949 LOC100136295 coding downstream 10566 62452719 ~ 62454817 (+)
LOC118937699 LOC100136295 coding downstream 16889 62459042 ~ 62461136 (+)
LOC118937700 LOC100136295 coding downstream 23207 62465360 ~ 62467468 (+)
LOC118937703 LOC106600765 coding downstream 114396 62556549 ~ 62558505 (+)
G1096142 NA non-coding upstream 64564 62375451 ~ 62375703 (+)
G1096141 NA non-coding upstream 65730 62374184 ~ 62374537 (+)
G1096120 NA non-coding upstream 66514 62373184 ~ 62373753 (+)
G1096139 LOC106567613 non-coding upstream 68969 62371074 ~ 62371298 (+)
G1096198 NA non-coding downstream 9433 62451586 ~ 62458508 (+)
G1096169 NA non-coding downstream 30105 62472258 ~ 62487929 (+)
G1096157 NA non-coding downstream 32570 62474723 ~ 62516878 (+)
G1096199 NA non-coding downstream 35007 62477160 ~ 62491891 (+)
G1096152 NA non-coding downstream 47021 62489174 ~ 62495463 (+)
G1095540 NA other upstream 1087922 61037739 ~ 61352345 (+)
mmp25a LOC106600705 other upstream 1474672 60931123 ~ 60965921 (+)
G1095209 NA other upstream 1621370 60816491 ~ 60818897 (+)
LOC110539079 LOC106600700 other upstream 1726255 60696612 ~ 60777061 (+)
G1095244 LOC108238713 other upstream 2054294 60385664 ~ 60385973 (+)
LOC100305204 hebp2 other downstream 860338 63302491 ~ 63334694 (+)
LOC110538933 LOC106600901 other downstream 1445943 63888086 ~ 63908673 (+)
G1097063 NA other downstream 1694205 64136358 ~ 64136704 (+)
G1097116 NA other downstream 1785848 64228001 ~ 64228684 (+)

Expression


Co-expression Network