G1096141


Basic Information

Item Value
gene id G1096141
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 62374184 ~ 62374537 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1246614
ctgttgccatgaAATGGTGGGGTCATGACAAGCCAACCAGGGAAGGCCCAGTACCACGGGAAatgcaggagagtcaatgagaaagagactgattctctcctcgtGACTCCCCTGCATCACCATGGCCAGGGAGATAGTGGCTTCCCTGATTAGTCCGGACCCCAATGGTCGACTATCCAGAGCGTGAACTGGGAAAGGTCTAACCACAGGAATAATGGGGATCGCTAAACAAAGAGCGAGCGctctgtcaataaaattcccagctgcgcctgaatctacgagcgccttatgctgggaatgcgggggaAAATCAGGAAAACAAACAGGTACAAACAGTTGGACAACAGAAGACTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1246614 True 354 lncRNA 0.51 1 62374184 62374537

Neighbor

gene id symbol gene type direction distance location
aldh16a1 aldh16a1 coding upstream 8670 62350796 ~ 62365514 (+)
kcnc3a LOC106600760 coding upstream 31245 62238004 ~ 62342939 (+)
zgc:193811 LOC106600757 coding upstream 168891 62201350 ~ 62205293 (+)
LOC110537935 LOC106600756 coding upstream 188218 62170639 ~ 62185966 (+)
doc2a LOC106600746 coding upstream 371098 61952290 ~ 62003086 (+)
LOC110537940 LOC106600765 coding downstream 17906 62392443 ~ 62398300 (+)
LOC110537942 LOC106600765 coding downstream 28152 62402689 ~ 62410184 (+)
LOC110515900 LOC100136295 coding downstream 59183 62433720 ~ 62443344 (+)
LOC100136295 LOC100136295 coding downstream 65730 62440267 ~ 62442153 (+)
LOC118937701 LOC100136295 coding downstream 71904 62441706 ~ 62448515 (+)
G1096120 NA non-coding upstream 431 62373184 ~ 62373753 (+)
G1096139 LOC106567613 non-coding upstream 2886 62371074 ~ 62371298 (+)
G1095995 LOC106600755 non-coding upstream 239959 62133419 ~ 62134225 (+)
G1096142 NA non-coding downstream 914 62375451 ~ 62375703 (+)
G1096160 NA non-coding downstream 5835 62380372 ~ 62489522 (+)
G1096159 NA non-coding downstream 41507 62416044 ~ 62658793 (+)
G1096191 NA non-coding downstream 45448 62419985 ~ 62580319 (+)
G1095540 NA other upstream 1021839 61037739 ~ 61352345 (+)
mmp25a LOC106600705 other upstream 1408589 60931123 ~ 60965921 (+)
G1095209 NA other upstream 1555287 60816491 ~ 60818897 (+)
LOC110539079 LOC106600700 other upstream 1660172 60696612 ~ 60777061 (+)
G1095244 LOC108238713 other upstream 1988211 60385664 ~ 60385973 (+)
LOC100305204 hebp2 other downstream 927954 63302491 ~ 63334694 (+)
LOC110538933 LOC106600901 other downstream 1513559 63888086 ~ 63908673 (+)
G1097063 NA other downstream 1761821 64136358 ~ 64136704 (+)
G1097116 NA other downstream 1853464 64228001 ~ 64228684 (+)

Expression


Co-expression Network