Gene
RNA
| Item | Value |
|---|---|
| gene id | G1092072 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 58205108 ~ 58205773 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1242086 | True | 666 | lncRNA | 0.41 | 1 | 58205108 | 58205773 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537844 | LOC106567395 | coding | upstream | 20659 | 58159958 ~ 58184449 (+) |
| ca4a | NA | coding | upstream | 103572 | 58076921 ~ 58101536 (+) |
| LOC110537841 | mtmr4 | coding | upstream | 133537 | 57893341 ~ 58071571 (+) |
| LOC110537840 | rnf43 | coding | upstream | 368840 | 57661839 ~ 57836268 (+) |
| LOC118937890 | NA | coding | upstream | 543547 | 57658505 ~ 57661561 (+) |
| LOC118937686 | NA | coding | downstream | 10369 | 58216142 ~ 58222215 (+) |
| LOC110537846 | ggnbp2 | coding | downstream | 20014 | 58225787 ~ 58272786 (+) |
| LOC110537848 | sp30l | coding | downstream | 68245 | 58274018 ~ 58286628 (+) |
| LOC110539153 | LOC106604490 | coding | downstream | 322517 | 58528290 ~ 58530219 (+) |
| LOC110538918 | nkx3-2 | coding | downstream | 339373 | 58545146 ~ 58546597 (+) |
| G1092071 | NA | non-coding | upstream | 144 | 58204710 ~ 58204964 (+) |
| G1092052 | vkorc1l1 | non-coding | upstream | 2416 | 58161242 ~ 58202692 (+) |
| G1091964 | NA | non-coding | upstream | 141748 | 57994286 ~ 58063360 (+) |
| G1091938 | NA | non-coding | upstream | 254659 | 57950185 ~ 57950449 (+) |
| G1091783 | NA | non-coding | upstream | 536152 | 57668705 ~ 57668956 (+) |
| G1092074 | NA | non-coding | downstream | 2376 | 58208149 ~ 58208834 (+) |
| G1092075 | NA | non-coding | downstream | 3645 | 58209418 ~ 58210303 (+) |
| G1092077 | NA | non-coding | downstream | 7525 | 58213298 ~ 58213583 (+) |
| G1092080 | NA | non-coding | downstream | 18633 | 58224406 ~ 58224606 (+) |
| LOC110537831 | dhx33 | other | upstream | 1087181 | 57112902 ~ 57118165 (+) |
| G1091235 | NA | other | upstream | 1452161 | 56752418 ~ 56752947 (+) |
| G1091217 | NA | other | upstream | 1479105 | 56725607 ~ 56726003 (+) |
| LOC110538908 | LOC106603872 | other | upstream | 3924387 | 54253719 ~ 54283905 (+) |
| G1093909 | NA | other | downstream | 1335785 | 59541558 ~ 59542603 (+) |
| G1094218 | LOC100380853 | other | downstream | 1825230 | 60031003 ~ 60034020 (+) |
| G1095244 | LOC108238713 | other | downstream | 2179891 | 60385664 ~ 60385973 (+) |
| LOC110539079 | LOC106600700 | other | downstream | 2490914 | 60696612 ~ 60777061 (+) |
