G1094084


Basic Information

Item Value
gene id G1094084
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 59685762 ~ 59686067 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1244278
cataccaagagcaccaacatagaaatgaaaagactagaacaccccctagtcacgccctgacctacaacaccatagagaaccaagggctctctatggtcagggtgtgagacAGATATCACTATGGTCTAGCAACAGAGATAAATTGACTGTTCAGTTgtggaggaggagactcagcctaggagaacgggttaaatatcagtgcttgtgtgaaatgtcggttgtctgaattacagctgtatcgaccctttgggaagaattaagcttggttaagcttctctagtgcccgtgagttatttactatgaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1244278 True 306 lncRNA 0.44 1 59685762 59686067

Neighbor

gene id symbol gene type direction distance location
LOC110537886 LOC106600678 coding upstream 11880 59672217 ~ 59673882 (+)
LOC110537890 NA coding upstream 74239 59599371 ~ 59611523 (+)
LOC118937690 NA coding upstream 87484 59596614 ~ 59598278 (+)
ccdc137 ccdc137 coding upstream 127283 59546119 ~ 59558479 (+)
nme4 LOC100301668 coding upstream 146389 59508568 ~ 59539373 (+)
atp6v0ca vatl coding downstream 2602 59688669 ~ 59702156 (+)
LOC110537889 LOC106561172 coding downstream 19878 59705945 ~ 59708325 (+)
LOC110537883 LOC106600674 coding downstream 24026 59710093 ~ 59726547 (+)
mrps34 mrps34 coding downstream 55099 59741166 ~ 59751234 (+)
nme3 nme3 coding downstream 69197 59755264 ~ 59760527 (+)
G1094010 amdhd2 non-coding upstream 92356 59591711 ~ 59593406 (+)
G1094009 NA non-coding upstream 98209 59586466 ~ 59587553 (+)
G1094003 NA non-coding upstream 108089 59577380 ~ 59577673 (+)
G1093979 NA non-coding upstream 168811 59516041 ~ 59516951 (+)
G1093974 NA non-coding upstream 182145 59503416 ~ 59503617 (+)
G1094095 NA non-coding downstream 48875 59734942 ~ 59735397 (+)
G1094098 NA non-coding downstream 65337 59751404 ~ 59751776 (+)
G1094106 NA non-coding downstream 66895 59752962 ~ 59753224 (+)
G1093909 NA other upstream 143159 59541558 ~ 59542603 (+)
LOC118937686 NA other upstream 1463572 58216142 ~ 58222215 (+)
LOC110537841 mtmr4 other upstream 1770930 57893341 ~ 58071571 (+)
LOC110537831 dhx33 other upstream 2567835 57112902 ~ 57118165 (+)
G1091235 NA other upstream 2932815 56752418 ~ 56752947 (+)
G1094218 LOC100380853 other downstream 344936 60031003 ~ 60034020 (+)
G1095244 LOC108238713 other downstream 699597 60385664 ~ 60385973 (+)
LOC110539079 LOC106600700 other downstream 1010620 60696612 ~ 60777061 (+)
G1095209 NA other downstream 1130424 60816491 ~ 60818897 (+)
mmp25a LOC106600705 other downstream 1268633 60931123 ~ 60965921 (+)

Expression


Co-expression Network