G1095485


Basic Information

Item Value
gene id G1095485
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 60938691 ~ 60939001 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1245876
agctacatgtgttgtgaatccagccaaaaTGTCAGAttttcggcaaaagcaaacgatgctattatctgagcatagcaccatagtaaacaaaagagagaacatttcaaccctgcaggcgcgacacaaactgcagaaataaaaatataaatcatgccttacctttgacgagcttcttctgttggcactccaatatgtcccataaacatcacaaatggtccttttgttcgattaattccgtccatatatatccacaATGTCCACAAtgttatttggcgcgtttgatccagaaaaacacaggttccaacttgcgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1245876 True 311 lncRNA 0.40 1 60938691 60939001

Neighbor

gene id symbol gene type direction distance location
bcl2l12 bcl2l12 coding upstream 45267 60886071 ~ 60893424 (+)
LOC118937692 NA coding upstream 94543 60842691 ~ 60844148 (+)
LOC110538924 LOC106600724 coding upstream 106591 60827444 ~ 60832100 (+)
LOC110539099 nosip coding upstream 125262 60808979 ~ 60813429 (+)
LOC110539110 LOC106600715 coding upstream 133578 60798241 ~ 60805113 (+)
LOC110539100 NA coding downstream 98723 61037724 ~ 61041909 (+)
LOC118937694 NA coding downstream 140567 61079568 ~ 61079848 (+)
LOC118937693 NA coding downstream 156790 61095791 ~ 61097619 (+)
LOC110539103 NA coding downstream 177697 61116698 ~ 61126203 (+)
LOC118937695 NA coding downstream 224832 61163833 ~ 61164098 (+)
G1095470 NA non-coding upstream 20580 60917873 ~ 60918111 (+)
G1095469 NA non-coding upstream 21657 60916832 ~ 60917034 (+)
G1095466 NA non-coding upstream 22494 60915888 ~ 60916197 (+)
G1095462 NA non-coding upstream 26587 60911891 ~ 60912104 (+)
G1095460 NA non-coding upstream 27032 60906339 ~ 60911659 (+)
G1095486 NA non-coding downstream 1292 60940293 ~ 60940578 (+)
G1095488 NA non-coding downstream 3719 60942720 ~ 60942993 (+)
G1095489 NA non-coding downstream 4713 60943714 ~ 60943928 (+)
G1095492 NA non-coding downstream 10332 60949333 ~ 60949550 (+)
G1095493 NA non-coding downstream 11107 60950108 ~ 60950677 (+)
G1095209 NA other upstream 119794 60816491 ~ 60818897 (+)
LOC110539079 LOC106600700 other upstream 224679 60696612 ~ 60777061 (+)
G1095244 LOC108238713 other upstream 552718 60385664 ~ 60385973 (+)
G1094218 LOC100380853 other upstream 904671 60031003 ~ 60034020 (+)
G1093909 NA other upstream 1396088 59541558 ~ 59542603 (+)
mmp25a LOC106600705 other downstream 15699 60931123 ~ 60965921 (+)
G1095540 NA other downstream 98738 61037739 ~ 61352345 (+)
LOC118937701 LOC100136295 other downstream 1507503 62441706 ~ 62448515 (+)
LOC100305204 hebp2 other downstream 2363490 63302491 ~ 63334694 (+)
LOC110538933 LOC106600901 other downstream 2949095 63888086 ~ 63908673 (+)

Expression


Co-expression Network