G1095506


Basic Information

Item Value
gene id G1095506
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 60990649 ~ 60991038 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1245899
TCTGTACGTTACTCTCCTCTACCAGAATCTCCCTGGCCTTGGCACACAGTGCTTTGACTTCATTTTCCTTGATAAGTTCACAACGCCTAAGTTGTTCTATCTGTCTGTCCAGATCACTGATGTCCCCCATTGTCACACACATATGGAGCGAGAGGCTCACACACAATCCTCACTCTGGGGTCTGGAGGAGTCACCTACAGGGCCTCGCAAACACAGAGTGTATTCTTCACACACAGTCACCCTGgtccggaacacacacacactcgctgttCAGGCAGTTATAGTCACAAAGAGAGAGCGGCAGAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1245899 True 306 lncRNA 0.50 2 60990649 60991038

Neighbor

gene id symbol gene type direction distance location
mmp25a LOC106600705 coding upstream 24728 60931123 ~ 60965921 (+)
bcl2l12 bcl2l12 coding upstream 97225 60886071 ~ 60893424 (+)
LOC118937692 NA coding upstream 146501 60842691 ~ 60844148 (+)
LOC110538924 LOC106600724 coding upstream 158549 60827444 ~ 60832100 (+)
LOC110539099 nosip coding upstream 177220 60808979 ~ 60813429 (+)
LOC110539100 NA coding downstream 46686 61037724 ~ 61041909 (+)
LOC118937694 NA coding downstream 88530 61079568 ~ 61079848 (+)
LOC118937693 NA coding downstream 104753 61095791 ~ 61097619 (+)
LOC110539103 NA coding downstream 125660 61116698 ~ 61126203 (+)
LOC118937695 NA coding downstream 172795 61163833 ~ 61164098 (+)
G1095509 NA non-coding upstream 16804 60973299 ~ 60973845 (+)
G1095504 NA non-coding upstream 17456 60971791 ~ 60973193 (+)
G1095501 NA non-coding upstream 24141 60966225 ~ 60966508 (+)
G1095493 NA non-coding upstream 39972 60950108 ~ 60950677 (+)
G1095492 NA non-coding upstream 41099 60949333 ~ 60949550 (+)
G1095540 NA non-coding downstream 46701 61037739 ~ 61352345 (+)
G1095574 NA non-coding downstream 198718 61189756 ~ 61190136 (+)
LOC110538925 cln3 non-coding downstream 282852 61258812 ~ 61285193 (+)
G1095617 NA non-coding downstream 366979 61358017 ~ 61358849 (+)
G1095209 NA other upstream 171752 60816491 ~ 60818897 (+)
LOC110539079 LOC106600700 other upstream 276637 60696612 ~ 60777061 (+)
G1095244 LOC108238713 other upstream 604676 60385664 ~ 60385973 (+)
G1094218 LOC100380853 other upstream 956629 60031003 ~ 60034020 (+)
LOC118937701 LOC100136295 other downstream 1455466 62441706 ~ 62448515 (+)
LOC100305204 hebp2 other downstream 2311453 63302491 ~ 63334694 (+)
LOC110538933 LOC106600901 other downstream 2897058 63888086 ~ 63908673 (+)
G1097063 NA other downstream 3145320 64136358 ~ 64136704 (+)

Expression


Co-expression Network