G1095617


Basic Information

Item Value
gene id G1095617
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 61358017 ~ 61358849 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1246025
ccaaacgtttcgACTGTTCCTGTGTatgtctctccttctcaccaGGCACGGCTGGGGGCACGGTGCGGCGCAGGGCGGTGACAGTTGCCATGGCTATCTCCTGGTTGCTAAACTTTCGGGAGCAGGAGTGTCCAGGGGTGACCATGTTGGGCTTCAGCAGGGTGCCCTCCAGGTACACATGGTGGTCAGAGAGAGCCTTATACACTGCAGCCAGAacctTCTGTGACATACTGGCAGCGCTTCAGGTCATGGTCTCCGTCTGGCAGGATCTCAGGCTCCACGATGGGCACGATGCCATGCTAGGGAAGGGCAAAGGAGCATGGCAACCAGCGTCATGACTACAGAACAGACAATACAACTTTTCAATGGCACCGGAGTTCGCA

Function

NR:

description
PREDICTED: fructose-bisphosphate aldolase A

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1246025 True 383 lncRNA 0.57 2 61358017 61358849

Neighbor

gene id symbol gene type direction distance location
LOC110539102 NA coding upstream 32862 61317055 ~ 61325155 (+)
LOC110538925 cln3 coding upstream 72824 61258812 ~ 61285193 (+)
LOC118936506 NA coding upstream 147536 61200915 ~ 61210481 (+)
LOC118936507 cln3 coding upstream 176241 61178894 ~ 61181776 (+)
LOC118937695 NA coding upstream 193919 61163833 ~ 61164098 (+)
LOC110539107 LOC106600721 coding downstream 165849 61524698 ~ 61530938 (+)
LOC110539080 LOC106600701 coding downstream 228714 61587563 ~ 61596487 (+)
nudt9 nudt9 coding downstream 315878 61674727 ~ 61682763 (+)
LOC110537909 ehd3 coding downstream 324118 61682967 ~ 61699122 (+)
atp2a1 atp2a1 coding downstream 365919 61724768 ~ 61753320 (+)
G1095574 NA non-coding upstream 167881 61189756 ~ 61190136 (+)
LOC118937693 NA non-coding upstream 260420 61095791 ~ 61097619 (+)
G1095540 NA non-coding upstream 316236 61037739 ~ 61352345 (+)
G1095506 NA non-coding upstream 366979 60990649 ~ 60991038 (+)
G1095615 aldoa non-coding downstream 687 61359536 ~ 61363938 (+)
G1095653 NA non-coding downstream 21376 61380225 ~ 61380439 (+)
G1095657 NA non-coding downstream 31212 61390061 ~ 61390342 (+)
G1095665 NA non-coding downstream 44772 61403621 ~ 61444941 (+)
G1095666 LOC106600702 non-coding downstream 46134 61404983 ~ 61446364 (+)
mmp25a LOC106600705 other upstream 392422 60931123 ~ 60965921 (+)
G1095209 NA other upstream 539120 60816491 ~ 60818897 (+)
LOC110539079 LOC106600700 other upstream 644005 60696612 ~ 60777061 (+)
G1095244 LOC108238713 other upstream 972044 60385664 ~ 60385973 (+)
LOC118937701 LOC100136295 other downstream 1087655 62441706 ~ 62448515 (+)
LOC100305204 hebp2 other downstream 1943642 63302491 ~ 63334694 (+)
LOC110538933 LOC106600901 other downstream 2529247 63888086 ~ 63908673 (+)
G1097063 NA other downstream 2777509 64136358 ~ 64136704 (+)
G1097116 NA other downstream 2869152 64228001 ~ 64228684 (+)

Expression


Co-expression Network