Gene
RNA
| Item | Value |
|---|---|
| gene id | G1095916 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 62003228 ~ 62004373 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1246366 | True | 1146 | lncRNA | 0.45 | 1 | 62003228 | 62004373 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| doc2a | LOC106600746 | coding | upstream | 142 | 61952290 ~ 62003086 (+) |
| nupr1b | LOC106600745 | coding | upstream | 107038 | 61894747 ~ 61896190 (+) |
| LOC110537918 | NA | coding | upstream | 166895 | 61835185 ~ 61836333 (+) |
| atxn2l | atxn2l | coding | upstream | 169627 | 61813631 ~ 61833601 (+) |
| sh2b1 | sh2b1 | coding | upstream | 189772 | 61794146 ~ 61813456 (+) |
| LOC110537935 | LOC106600756 | coding | downstream | 166266 | 62170639 ~ 62185966 (+) |
| zgc:193811 | LOC106600757 | coding | downstream | 196977 | 62201350 ~ 62205293 (+) |
| kcnc3a | LOC106600760 | coding | downstream | 233631 | 62238004 ~ 62342939 (+) |
| aldh16a1 | aldh16a1 | coding | downstream | 346423 | 62350796 ~ 62365514 (+) |
| LOC110537940 | LOC106600765 | coding | downstream | 388070 | 62392443 ~ 62398300 (+) |
| G1095900 | NA | non-coding | upstream | 110230 | 61892656 ~ 61892998 (+) |
| G1095895 | NA | non-coding | upstream | 122861 | 61879864 ~ 61880367 (+) |
| G1095894 | NA | non-coding | upstream | 123610 | 61879311 ~ 61879618 (+) |
| G1095893 | NA | non-coding | upstream | 124799 | 61878171 ~ 61878429 (+) |
| G1095971 | NA | non-coding | downstream | 14043 | 62018416 ~ 62023397 (+) |
| G1095965 | NA | non-coding | downstream | 46765 | 62051138 ~ 62057299 (+) |
| G1095989 | NA | non-coding | downstream | 53183 | 62057556 ~ 62119496 (+) |
| G1095993 | fam57bb | non-coding | downstream | 63689 | 62068062 ~ 62072963 (+) |
| G1095994 | NA | non-coding | downstream | 72389 | 62076762 ~ 62079485 (+) |
| G1095540 | NA | other | upstream | 650883 | 61037739 ~ 61352345 (+) |
| mmp25a | LOC106600705 | other | upstream | 1037633 | 60931123 ~ 60965921 (+) |
| G1095209 | NA | other | upstream | 1184331 | 60816491 ~ 60818897 (+) |
| LOC110539079 | LOC106600700 | other | upstream | 1289216 | 60696612 ~ 60777061 (+) |
| G1095244 | LOC108238713 | other | upstream | 1617255 | 60385664 ~ 60385973 (+) |
| LOC118937701 | LOC100136295 | other | downstream | 442131 | 62441706 ~ 62448515 (+) |
| LOC100305204 | hebp2 | other | downstream | 1298118 | 63302491 ~ 63334694 (+) |
| LOC110538933 | LOC106600901 | other | downstream | 1883723 | 63888086 ~ 63908673 (+) |
| G1097063 | NA | other | downstream | 2131985 | 64136358 ~ 64136704 (+) |
| G1097116 | NA | other | downstream | 2223628 | 64228001 ~ 64228684 (+) |
