XLOC_029881 (slc2a11b)


Basic Information

Item Value
gene id XLOC_029881
gene name slc2a11b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 10014604 ~ 10046183 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00058574
ATCGCCAGTCTTTCTATCGACACAATAAAATTAGTATTTCggtcaaaaatgaatgaaattacgaTCAGTGGCCCGGAAGCGCAGCCCACAACATTAGCAAAAAAGGTTCCCAGTAAATATCTTCTACTTGCTGTTTGGGCAGCTGGGATTGGTGGAACATTTCAATATGGCTACAATATATCCATAATAAATGCACCTACCAAGGCTGTGCAGAACTTTATTAATCAGACCTGGACGGAGCGCTACAGCACTGAAATCTCCAGTGATATGTTAACCCTCCTCTGGTCCATCATCGTCTCCATCTTCACTATCGGTGGGCTTGTAGGAGCGTCTGTCGGAGGAACACTGGCTATTAGATTCGGAAGGAAAGGGACTCTACTGTTCAACAACACCTTTGCTCTGTTGGCTGCTTTGTTCATGGGTTTAAGTTATCCTGCAAGCACTTTTGAGCTTTTAGTCATTGGACGCTTCCTGACAGGAGTAAATGCAGGTATTGCGATATGTGTTCAGCCTCTGTACATTGGAGAAATTGCACCTCGGGCTCTGCGTGGAGCAATGGCCATGGGAACCTCCATCTTCATCACCGGAGGAATCCTGACAGGACAGGTTATGGGCCTCAAAGAATTGTTAGGAAAGGATGAGTACTGGCCGATCCTCTTGTCCACCATCTGTATTCCAGCCGTCCTGCAGCTTCTGACTCTGCCCTGGTTCCCGGAGAGTCCTCGATACCTGCTCATCGACCGAGGGGACGACATCGCCTGCCAGAAGGCTCTAATGTGGTTCCACGGCCAGGATAAGTACCACGGAGAAATGGAGGACATTGAAAGAGAAAGGGTCAGCGCTCTCGGCATTAAACCCAAAAAGCCTTGGGAGCTTTTTACGGACAGAAGTATCCGCTGGCAGCTCCTCACTCTCGTGGTGATCCACACGTCCCAGCAACTCAATGGCATTAATGCGATTTATTTCTATGCAGACTACGTGTTCACCCAGGCTGGGATTCCAGATGACAAGATTCCTTATGCTACAGTGGGAACCGGAGCCTGCGAGTGCATCACTGCACTGACCTGCggtcTTCTGATCGAGTCTTTGGGAAGAAGAGCTCTTATTATCGGAGGTTATACTCTGATGAGCGTGTGCTGCATTTGTTTCACCATCGCACTCACTTTTCAGGATTCAAGCCCTTGGGTTCCCTACCTTAGTATGGTCTGTGTTTTGGCCTTTATCCTCAGTTTTGGCCTTGGTCCAGGTGGAGTGACAAACATTTTAACAACAGAGCTGTTCACACAAACCGATCGGCCTGCCGCATACATGATCGGTGGCTCAATCAACTGGACCTCCTTCTTTGTGATCGGCATGATCTTTCCATTTATTGTGAATGGCCTCAAGCAATACTGCTTCCTCGTTTTCCTGGTCATCTGCTTATTGGTGGCCACGTACATCTTCTTTGTGGTCCCTGAAACCAAAAACAAGACCTTTCTGGAGATTCAGAACGAATTTAAGTCTAGAAAGAAGATCATTAATGCCAACGGCACTGAGGGCCCTCTGCTGTCCACACCAATGTAatgcacacatacagtatgaCTGCACTTTAAAGGGTTTTACGATGCTACTGTATTGAATATATGCATTCATCTGCCAAAATGGAAATATAAGATCTGCAAacactgaagtcagaattattagcccttttgtatattatatatatatatatatatatatatatatatatatatatatatatagagagagagagagagagagagagagagagagagagagagagaaattttaacacatttataaacataacagtttaaaCAACTCATTTCTTactgatttatattatatttaccatgatgacagtacatagtatttgactagatatttttcaagatactagtattcagtgacatttaaaggcttaactaggttaatgaggaaattcattgtataacgatgttttgttctgtagtcaatttaaaaatatatagcctaagggggataataatattgacataaatattacataaatattgattaatatttaaaaaaaattaaaaactacttttattctagccgaaataaaacaaataagactttttccacaagaaaaaatattataggaaatactgttaaaaaattcttgctctgtttaacatcaattgggaaatatctGAGAaactcacaggagggcgaatcattctgacttcaactgtataattgtGTGTGAAGTTATTGACACACACAGACGCTGCACTACATCATGTGCCTTCAGCTTGAATACTGTCCTTTTTGTTAGCAGGGGCAGTCACATGACAGGAGGGACTTTCAATTGTATTTTGAATGTGTTTTATACAAATTAGTATGGCTGAAACTATTATGCAGCAACGTATCATATAGAATTTCTCCTGTGATACCGATATTTTTTGTTAGTCTTCAATAATGCAAAATGGATCCATATGAGGAACTGGAGTCTCATGAAATCACTGCAatcatgtttaaatttattttacagtttagtCTACAATTTTAATATTGACAATAAAGGATTTTTTCAATCTAAAAA
>TCONS_00058575
ACATTTCAGAGACTGCAGGCAAGATTAAGAGACGTTTAGAGTATTAAGTCAAATGTTAAAGCTTTTTAAAGGGCGAGCTGCAAAAATGGGCAAAGAAAACGGAGAATTTAAGGAGTATGAGCCTTTACTTAGAGACTTCAGAGAACCTGTTCATCAAATTAAGGTTCCCAGTAAATATCTTCTACTTGCTGTTTGGGCAGCTGGGATTGGTGGAACATTTCAATATGGCTACAATATATCCATAATAAATGCACCTACCAAGGCTGTGCAGAACTTTATTAATCAGACCTGGACGGAGCGCTACAGCACTGAAATCTCCAGTGATATGTTAACCCTCCTCTGGTCCATCATCGTCTCCATCTTCACTATCGGTGGGCTTGTAGGAGCGTCTGTCGGAGGAACACTGGCTATTAGATTCGGAAGGAAAGGGACTCTACTGTTCAACAACACCTTTGCTCTGTTGGCTGCTTTGTTCATGGGTTTAAGTTATCCTGCAAGCACTTTTGAGCTTTTAGTCATTGGACGCTTCCTGACAGGAGTAAATGCAGGTATTGCGATATGTGTTCAGCCTCTGTACATTGGAGAAATTGCACCTCGGGCTCTGCGTGGAGCAATGGCCATGGGAACCTCCATCTTCATCACCGGAGGAATCCTGACAGGACAGGTTATGGGCCTCAAAGAATTGTTAGGAAAGGATGAGTACTGGCCGATCCTCTTGTCCACCATCTGTATTCCAGCCGTCCTGCAGCTTCTGACTCTGCCCTGGTTCCCGGAGAGTCCTCGATACCTGCTCATCGACCGAGGGGACGACATCGCCTGCCAGAAGG
>TCONS_00058576
CTTGAACGGATGTCATGATGTGCACTCAGTAGGGAGCTAAACTGAAGCCGTTGAGCTATAATAGCCAACAACAGAAAGCCAGAAGAAGAGTATCTCGTGAGTCAAGGAATGCTATGCCTCTATTCTGTTTTTCCCTCAGCTCTAATGTGGTTCCACGGCCAGGATAAGTACCACGGAGAAATGGAGGACATTGAAAGAGAAAGGGTCAGCGCTCTCGGCATTAAACCCAAAAAGCCTTGGGAGCTTTTTACGGACAGAAGTATCCGCTGGCAGCTCCTCACTCTCGTGGTGATCCACACGTCCCAGCAACTCAATGGCATTAATGCGATTTATTTCTATGCAGACTACGTGTTCACCCAGGCTGGGATTCCAGATGACAAGATTCCTTATGCTACAGTGGGAACCGGAGCCTGCGAGTGCATCACTGCACTGACCTGCggtcTTCTGATCGAGTCTTTGGGAAGAAGAGCTCTTATTATCGGAGGTTATACTCTGATGAGCGTGTGCTGCATTTGTTTCACCATCGCACTCACTTTTCAGGATTCAAGCCCTTGGGTTCCCTACCTTAGTATGGTCTGTGTTTTGGCCTTTATCCTCAGTTTTGGCCTTGGTCCAGGTGGAGTGACAAACATTTTAACAACAGAGCTGTTCACACAAACCGATCGGCCTGCCGCATACATGATCGGTGGCTCAATCAACTGGACCTCCTTCTTTGTGATCGGCATGATCTTTCCATTTATTGT

Function

symbol description
slc2a11b Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in brain; gill; heart; integument; and kidney. Orthologous to human SLC2A11 (solute carrier family 2 member 11).

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0022857 transmembrane transporter activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070705-96 Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in brain; gill; heart; integument; and kidney. Orthologous to human SLC2A11 (solute carrier family 2 member 11).

Ensembl:

ensembl_id ENSDARG00000063288

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00058574 False 2566 mRNA 0.40 12 10014604 10046183
TCONS_00058575 False 827 mRNA 0.47 6 10015002 10027592
TCONS_00058576 True 743 lncRNA 0.48 5 10029602 10041598

Neighbor

gene id symbol gene type direction distance location
XLOC_029880 NA coding upstream 130999 9881349 ~ 9883605 (+)
XLOC_029879 NA coding upstream 314362 9694317 ~ 9700242 (+)
XLOC_029878 NA coding upstream 336524 9674243 ~ 9678080 (+)
XLOC_029877 ugt2a7 coding upstream 576234 9428876 ~ 9438370 (+)
XLOC_029876 zgc:172315 coding upstream 591792 9417409 ~ 9422812 (+)
XLOC_029882 gstt2 coding downstream 460 10046643 ~ 10056341 (+)
XLOC_029883 si:ch211-207k7.4 coding downstream 37917 10084100 ~ 10093431 (+)
XLOC_029884 NA coding downstream 96706 10142889 ~ 10231246 (+)
XLOC_029885 NA coding downstream 200676 10246859 ~ 10275553 (+)
XLOC_029886 BX005024.1 coding downstream 219465 10265648 ~ 10266690 (+)
XLOC_029873 NA non-coding upstream 626155 9387055 ~ 9388449 (+)
XLOC_029872 NA non-coding upstream 634439 9379484 ~ 9380165 (+)
XLOC_029887 BX005024.2 non-coding downstream 289952 10336135 ~ 10336763 (+)
XLOC_029888 BX511089.4 non-coding downstream 333110 10379293 ~ 10600162 (+)

Expression


Co-expression Network