XLOC_029885


Basic Information

Item Value
gene id XLOC_029885
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 10246859 ~ 10275553 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00061404
gagtataataaaaaaaaaaagaattgaaaggTCGCTTCATCGATTCATTATTGTTTTCTCAGGTCTGAGATCTGAACTCTTCCAACCCAAGCATCCATGCATTCAGAATCAGCGAATTTATCTTAAACCTGCCTGAAAGAAGAAGCCATCCTGCACCTCTCTCCCTCAGATGTTGCACAGACTGTGTTTTTTATCAGTCAATTGAACTGTCCTGCATGACTCAAGAGGAAGACTAATATTCCAGTGAAGACTCCATCCATCCCGGAGTCCAGGAGTCGTGCTGTTTAGGAACAGAACAAAGTGAACATCATGTCTCTGCAGattAAAAAGTCCATGAAGACACTAGAAAACTGGGATTGTTCGTCACACAGCAAGACTCAGCAACATCATGTGGCTTGACTCAATAAGACAAATTGGGCTGAATTGGAAACAgcagttttttcatgttttctgcGAGCAGCTATTGGCTTTCGGAGAACTTTCAAACAGTTTGTTTAAAGAGGAGCGCAAATGAAAAGGAATGGCGATCGATAATTGAGAAAAGGCTTTGTAGGGCCGATTGATGAAATGAGGTTGGAGAAGAAGGCAGCCTGACCATCTCTCTTAGCGTCAGACTGACCAGCTCAGAATCCAATTGTGTTGCTGTGGTTGTGAGTCTTTGTTCTCCATTTTCTTTCACAAAAATGCTATTGTGAGATGGGTTTTTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00061404 True 707 lncRNA 0.42 4 10246859 10275553

Neighbor

gene id symbol gene type direction distance location
XLOC_029884 NA coding upstream 15613 10142889 ~ 10231246 (+)
XLOC_029883 si:ch211-207k7.4 coding upstream 153428 10084100 ~ 10093431 (+)
XLOC_029882 gstt2 coding upstream 190518 10046643 ~ 10056341 (+)
XLOC_029881 slc2a11b coding upstream 200676 10014604 ~ 10046183 (+)
XLOC_029880 NA coding upstream 363254 9881349 ~ 9883605 (+)
XLOC_029887 BX005024.2 coding downstream 60582 10336135 ~ 10336763 (+)
XLOC_029888 BX511089.4 coding downstream 103740 10379293 ~ 10600162 (+)
XLOC_029889 BX511089.1 coding downstream 236405 10511958 ~ 10512328 (+)
XLOC_029890 CR790366.2 coding downstream 443749 10719302 ~ 10721819 (+)
XLOC_029891 CR790366.1 coding downstream 471741 10747294 ~ 10749804 (+)
XLOC_029879 NA non-coding upstream 546617 9694317 ~ 9700242 (+)
XLOC_029878 NA non-coding upstream 568779 9674243 ~ 9678080 (+)
XLOC_029873 NA non-coding upstream 858410 9387055 ~ 9388449 (+)

Expression


Co-expression Network