XLOC_029884


Basic Information

Item Value
gene id XLOC_029884
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 10142889 ~ 10231246 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00061647
TTTGGTACTATCCAATCTCCGCCGCCGCCCGCCCTCTCTCCAATTCACAGTAACTAACAGCACAAACACCCACCTGTTCTCAACTTCATTACTCAAAATAACCAAGTCCGACCCGCCCTCCAGTTCTCTCTGAATTTCGGAAACAAATGGTGGCACGCACTGTATGCTCTATATCTTTAAATAATGCACAAATTGAGGGAGCAACAGCCATACCATTTTCCCGCCGAATGCATTTCCGcttctgaccacaagatggcggACATCCACAGCAGAATCCCAACAGTGAAGCTTGGATGAGAAATCAGGCTAATCTTCTGTTAGTGAAGTTGCTGTGGGATATCATGAGAAGGACTGTTAAGAGTAAGATTCATTCAAGTTGGATTTAGGAGCCGCTTCCGCAAAATCTGGAACCAGCGATGCCATGTTGCTTCATGATGTCACATGTTGAAGACATCTGATTGTGATCCTCTCTGATCCAGCCCGTCTTATTACATTCCTTCATTCCCAGACACTGTCATCTCGCTCATATTAAATTCTTATCACACAGTTCAAGTCAGCGGCAGTGGCATTAAATGCACTGTAAACatactgattattttttttacatccctACATCACGTGCTTTTAAAAAATAGTCTCTTCATTAAAAACATGGACTTTCGTGTAACAATaaactaaatgttaaaatatgttagaccttttaacaccatttatatttgtttcagatATAACAGGTAATGTTCTTGTTGTCATTTTCCCAATAAGAAAAGGCCTGTTTTGAatttctttagaatatcttgaTTAAATCAACAACATTTAAGTAATTTTAATATTATCTAAGAACGTATTTGCTATAACAGCAGCActaattggaaataaaataattgtatactgtatgtacagtgcCAAGAATAAATTAGTATACTCCTTATTAAAATTAGTAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00061647 True 944 lncRNA 0.38 3 10142889 10231246

Neighbor

gene id symbol gene type direction distance location
XLOC_029883 si:ch211-207k7.4 coding upstream 49458 10084100 ~ 10093431 (+)
XLOC_029882 gstt2 coding upstream 86548 10046643 ~ 10056341 (+)
XLOC_029881 slc2a11b coding upstream 96706 10014604 ~ 10046183 (+)
XLOC_029880 NA coding upstream 259284 9881349 ~ 9883605 (+)
XLOC_029879 NA coding upstream 442647 9694317 ~ 9700242 (+)
XLOC_029885 NA coding downstream 15613 10246859 ~ 10275553 (+)
XLOC_029886 BX005024.1 coding downstream 34402 10265648 ~ 10266690 (+)
XLOC_029887 BX005024.2 coding downstream 104889 10336135 ~ 10336763 (+)
XLOC_029888 BX511089.4 coding downstream 148047 10379293 ~ 10600162 (+)
XLOC_029889 BX511089.1 coding downstream 280712 10511958 ~ 10512328 (+)
XLOC_029878 NA non-coding upstream 464809 9674243 ~ 9678080 (+)
XLOC_029873 NA non-coding upstream 754440 9387055 ~ 9388449 (+)
XLOC_029872 NA non-coding upstream 762724 9379484 ~ 9380165 (+)

Expression


Co-expression Network