XLOC_029882 (gstt2)


Basic Information

Item Value
gene id XLOC_029882
gene name gstt2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 10046643 ~ 10056341 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00058577
GATTGGACTATGGACTGTGACGCTGGACGAGCAGGAATACATGTTGTTTCTGTCTACAGTACGGGACATACTCACGCTTCACCATGACCGGCAGACAGGCAGTAAAAGCGTATTTAGATCTCATGTCACAGCCATGCAGAGCTGTGCTGATATtcctaaaacataataaaataccaCACACGGTGGAACAAATTGCGATAAGAAAAGGGGAGCAGAAAACACCCGAGTTCACCAAACTCAACCCTATGCAAAAGGTGCCAGTGCTGGAGGACAATGGCTTTGTTCTTACTGAAAGTGACGCTATTTTGAAGTATCTGGCAACAACCTACAAAGTGCCCGATCACTGGTACCCCAAGCTTCCTGAGAAAAGAGCGCGAGTTGATGAATACACAGCCTGGCATCACATGAACACTCGCATGCACGCTGCCACAGTCTTCTGGCAAGAGGTTTTACTGCCACTCATGACAGGACAGCCGGCAAATACTGCAAAGCTGGAAAAGGCCCTATCAGACCTGAGCGGCACACTAGACAAGCTggaaaacatgtttctgaagagaCAGGCCTTCCTGTGCGGGGATGACATCTCATTGGCTGACTTGCTTGCGATTTGTGAACTCATGCAGccaatgagcAGCGGGAGGGACATTCTGAAGGACAGACCCAAACTGTTGAGCTGGAGGAGTCGAGTCCAGTCAGCGCTGTCCGACTCCTTTGATGAAGCTCACACCATTGTCTACCGCCTGAGGGACAAATTCACTGCTAAACTGTGAAAAATCACAGGGCAAGGTGTTTCTGCACTTGACTTAGTGTGATTACGAATTTAGTCCGTCTAATAACGATATGCAGTTTGATTAATTTACAGTAATCAAGACATGCATCACAAGTATTGTTCAAATGTGGACAACGTGTGTGCCTTTTTAAAGGAAAATCTGCATAATTTAAATGTGACGTTGTTGTGATTATCATGCATTATATTATTACACATACAGTGCACAGCATAAACAAGCACGACTCCTTTTAACTCTCTTTTGTGTATCGTTCTAATTGACCACACTTTCGTTATGTTggaggctgtttttgccccattgacttccattataatcacatttattgactGCAAAGccttgacagcatataatcatgcaggCTTAATTGTgcttttccctgttgggaagaggtcaaatttatCACTTTTACTGGTGATCATTAGTTGGCTTTAGAAAAGCATGTGCAAgcaagtttctggcttttatatggagttctatgaTTGTAAAACCAGctacaatcaagaatgcatgattatgtcATGGATTTGCAAAACATGTTATTATAATAGAagccaatggggcaaaaacagccaccaacacaACTAAAGGATAGTCAATTTGCCCAGTGTGAatcatttttttccaaaattgatgtcaaaataagatttgttaccaaaaatcatcccatttgctgaaacacagaaagtTGACAAAATTAAGCCTCAAATTCACCttagagtggatgaaaacatccccaacccCACACGAGggttaatgttaatatttttatacatttctcagtgaatataaatatattatggtgcatttaaataaaagttttattaaacagttatactCATTAAAATAAGAGTCATCTTGaggaaatgaatgaaaacacatttaaaattaaaataaaaagttataaactacaaaattccccctaaatttgatgttattttatGGTTCTATTAAgtctttttctttattataaatgtttaatatttccCCGAACATATTTATTGGTTGAAAAAAAATTTGCACTTCAGTCTTAAGTTATTTAGTCAGATCACTTCCAGTTTTGGCTTCGgcatactgactaatctaatgtatacactcgccggccacttcattaggtacacctgtccaactgctcgtttacacaaatttctaatcagtccatcacatggcagcaaatcaatgcatatagacatgtagacatggtcaagaggatctgctgcggtttaaaccgagcatcagaattgtggcatggttgttggtgccagacgggctggtctgagtatttcagaaactgctgatctactgggattttcacgcacaaccatctctagggtttacagagaatggtctgaaaaagagaaaatatctagtgagtggtagttctgtgggcgcaaatgccttgttgatgccagaggttggaggagaatggccagactggttccagctgatagaaaggcaacagtaactcaaataaccactcagcagaagagcatctctgaacacacaacacatcctgAGGTGGACGGGCTGCAGCAGCAGATCACCACACCGAtggtcttctgatggctactttcagtagtataacgcaccatgtcataaagtgcaaatcatctcagactggtttcttgaacatgacaatgacttcactgtactcaaatgggctCCAGAGTCACCAgacttcaatccaatagagcacctttgggatacgGTGGAaaaagagatttgcatcatggatgtgcagccgccaaaatctctgaggaacatttccgatgctttttaaaatctttgCCATGAAGTATTAAGgaagttctaaaggcaaaagggggttcaaccctatactagtaaggtgtacctaataaagtggccggtgagtgttcaTACAAATATCTTGAGTAACATCCTTTAGAAaagattaatttaaaagagatctGTTAGAGGTGGACTGTACTCATTTATACTGGGCACTGTAtgcaatgcattttatttaagtgAACAAACCAATTTTTGATGCAGAACATAATTCATAAGCATTGGTCTTGGTTATACGAGACCGAATTATACTAAAAAGGGATTGAAAATCTGCATAGACATCTGCCTGTAGGATTAAGGACTAATTGTTGGAAAAATTCAATCCCACATAGAACTCCAGAGTGTGCCTTTTGAACACCTTCaattttatacaaattattttagaaattaaatagaaaaatgatcCGTGATAAGGTTACAAAATCAGAGGAATAGAAAATGtaaaaccattttattttttacaagaaATGGTACAAACACGTATTTACAAGAGCAGTACAGTGTTGAACAGATCACAGGACTACGTTTTAAAAGGCCATCATCAGAACAAATACAAAAACTTCTAAAAGCATGTGAAGATCAAGGCCCGGGTTTCCTCTTGGATGCTGGTTCACCTTCTCCCTCTTGTGCCTTGCGTTTCTGCttgaaaatgttcaaataaaattatgtttAGTTTTCAATAACTACTGAAGCATTTGCAATTGACATTTGCATTGAATCGTAAAATGTTGAAAATCCAATAATTAATTTCCTCTAAAGTTTCATTAAAACTTTTAATGTAATAA
>TCONS_00058578
ACAGTACGGGACATACTCACGCTTCACCATGACCGGCAGACAGGCAGTAAAAGCGTATTTAGATCTCATGTCACAGCCATGCAGAGCTGTGCTGATATtcctaaaacataataaaataccaCACACGGTGGAACAAATTGCGATAAGAAAAGGGGAGCAGAAAACACCCGAGTTCACCAAACTCAACCCTATGCAAAAGGTGCCAGTGCTGGAGGACAATGGCTTTGTTCTTACTGAAAGTGACGCTATTTTGAAGTATCTGGCAACAACCTACAAAGTGCCCGATCACTGGTACCCCAAGCTTCCTGAGAAAAGAGCGCGAGTTGATGAATACACAGCCTGGCATCACATGAACACTCGCATGCACGCTGCCACAGTCTTCTGGCAAGAGGTTTTACTGCCACTCATGACAGGACAGCCGGCAAATACTGCAAAGCTGGAAAAGGCCCTATCAGACCTGAGCGGCACACTAGACAAGCTggaaaacatgtttctgaagagaCAGGCCTTCCTGTGCGGGGATGACATCTCATTGGCTGACTTGCTTGCGATTTGTGAACTCATGCAGccaatgagcAGCGGGAGGGACATTCTGAAGGACAGACCCAAACTGTTGAGCTGGAGGAGTCGAGTCCAGTCAGCGCTGTCCGACTCCTTTGATGAAGCTCACACCATTGTCTACCGCCTGAGGGACAAATTCACTGCTAAACTGTGAAAAATCACAGGGCAAGGTGTTTCTGCACTTGACTTAGTGTGATTACGAATTTAGTCCGTCTAATAACGATATGCAGTTTGATTAATTTACAGTAATCAAGACATGCATCACAAGTATTGTTCAAATGTGGACAACGTGTGTGCCTTTTTAAAGGAAAATCTGCATAATTTAAATGTGACGTTGTTGTGAACATCTGCCTGTAGGATTAAGGACTAATTGTTGGAAAAATTCAATCCCACATAGAACTCCAGAGTGTGCCTTTTGAACACCTTCaattttatacaaattattttagaaattaaatagaaaaatgatcCGTGATAAGGTTACAAAATCAGAGGAATAGAAAATGtaaaaccattttattttttacaagaaATGGTACAAACACGTATTTACAAGAGCAGTACAGTGTTGAACAGATCACAGGACTACGTTTTAAAAGGCCATCATCAGAACAAATACAAAAACTTCTAAAAGCATGTGAAGATCAAGGCCCGGGTTTCCTCTTGGATGCTGGTTCACCTTCTCCCTCTTGTGCCTTGCGTTTCTGCttgaaaatgttcaaataaaattatgtttAGTTTTCAATAACTACTGAAGCATTTGCAATTGACATTTGCATTGAATCGTAAAATGTTGAAAATCCAATAATTAATTTCCTCTAAAGTTTCATTAAAACTTTTAATGT

Function

symbol description
gstt2 Predicted to enable glutathione transferase activity. Predicted to be involved in glutathione metabolic process. Predicted to be active in cytoplasm. Is expressed in brain; gill; liver; and pleuroperitoneal region. Orthologous to human GSTT2 (glutathione S-transferase theta 2 (gene/pseudogene)).

GO:

id name namespace
GO:0006749 glutathione metabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0004364 glutathione transferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1617 Predicted to enable glutathione transferase activity. Predicted to be involved in glutathione metabolic process. Predicted to be active in cytoplasm. Is expressed in brain; gill; liver; and pleuroperitoneal region. Orthologous to human GSTT2 (glutathione S-transferase theta 2 (gene/pseudogene)).

Ensembl:

ensembl_id ENSDARG00000095464

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00058577 False 3379 mRNA 0.39 5 10046643 10056341
TCONS_00058578 True 1406 mRNA 0.41 6 10046698 10056336

Neighbor

gene id symbol gene type direction distance location
XLOC_029881 slc2a11b coding upstream 460 10014604 ~ 10046183 (+)
XLOC_029880 NA coding upstream 163038 9881349 ~ 9883605 (+)
XLOC_029879 NA coding upstream 346401 9694317 ~ 9700242 (+)
XLOC_029878 NA coding upstream 368563 9674243 ~ 9678080 (+)
XLOC_029877 ugt2a7 coding upstream 608273 9428876 ~ 9438370 (+)
XLOC_029883 si:ch211-207k7.4 coding downstream 27759 10084100 ~ 10093431 (+)
XLOC_029884 NA coding downstream 86548 10142889 ~ 10231246 (+)
XLOC_029885 NA coding downstream 190518 10246859 ~ 10275553 (+)
XLOC_029886 BX005024.1 coding downstream 209307 10265648 ~ 10266690 (+)
XLOC_029887 BX005024.2 coding downstream 279794 10336135 ~ 10336763 (+)
XLOC_029873 NA non-coding upstream 658194 9387055 ~ 9388449 (+)
XLOC_029872 NA non-coding upstream 666478 9379484 ~ 9380165 (+)
XLOC_029888 BX511089.4 non-coding downstream 322952 10379293 ~ 10600162 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000338_00703034_00706340 GSTT2 coding CI01000338 null 703034 ~ 706542 (+)