XLOC_029889 (BX511089.1)


Basic Information

Item Value
gene id XLOC_029889
gene name BX511089.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 10511958 ~ 10512328 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00058584
GATGATaggttattaattatattataaatggttatgttctggtcaatgaaataataccCTTAggagaattctgctttgcatttttctatgcattactaacatcactaaaccagacatttgttttataagttaaccaaatattcgCAGAGATTCAGCGGTTTTTGTCTGACGCGTTTGCCATTCATgccagtcagtgaaaaaaaagtaactgtggCCCTGTTTGCAGGTATTAAGATTcgttttcatcaatctgatgcaacttttattatttacaggacgtaaaaatgcaattaaaagtttcaaatcaat

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000092211

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00058584 True 309 processed_transcript 0.32 2 10511958 10512328

Neighbor

gene id symbol gene type direction distance location
XLOC_029887 BX005024.2 coding upstream 175195 10336135 ~ 10336763 (+)
XLOC_029885 NA coding upstream 236405 10246859 ~ 10275553 (+)
XLOC_029886 BX005024.1 coding upstream 245268 10265648 ~ 10266690 (+)
XLOC_029884 NA coding upstream 280712 10142889 ~ 10231246 (+)
XLOC_029883 si:ch211-207k7.4 coding upstream 418527 10084100 ~ 10093431 (+)
XLOC_029890 CR790366.2 coding downstream 206974 10719302 ~ 10721819 (+)
XLOC_029891 CR790366.1 coding downstream 234966 10747294 ~ 10749804 (+)
XLOC_029892 NA coding downstream 249166 10761494 ~ 10784742 (+)
XLOC_029893 NA coding downstream 450699 10963027 ~ 10964817 (+)
XLOC_029894 SCARF2 coding downstream 778523 11290851 ~ 11366499 (+)
XLOC_029880 NA non-coding upstream 628353 9881349 ~ 9883605 (+)
XLOC_029896 NA non-coding downstream 985437 11497765 ~ 11501164 (+)

Expression


Co-expression Network