XLOC_030151 (tsc1a)


Basic Information

Item Value
gene id XLOC_030151
gene name tsc1a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 29652198 ~ 29711948 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00058953
cgTCGTTTTTAAAATTCTATTACAAGTTATTAAAAAATCCATTGCAAATGTTATCATTTCTGTTTACATAGTAGCCTATTAGATTTGTTTGCCATGTCCACTGTCACTTTGAGTTGAAATAAGTTTAGGAATTAAGCAAGAATATGATATTAGGAACGTCAAACTGCTCGTTTTATTAATGGCAATGTAAATTAAGAAAACTCACACTGCTTGCTGTTTGCAAATAAACATGTTTGTCCTTTAAAGGCCGCGCATGCGCTGTGCGATTCTGTCACGCTGAAGCCGCTACATGCTTAGCTAGCTCTCATTGCACAGCAGCACTTCACACCTATCTGCCACTCATGCCGTGATCTTGTGACAGCGAGACGGAGGAGTCGTTCATACATAGGCACCCCATGCTGACACCACAGGAcatcgatttctgctgtgacaaaGGCATCAGTCCTGCCCACTGTCCTGCACAACTATGGCCAAAGAGCAGCCAAGTGTGTTTGACCTCATCCCTCTTCTGGGGTCCACTGACCTACATGAGCTGGAACAGGTCAAAACCTTGCTGCAGGAAACTCTCAGTGCAGATAAAGGGACCATGTTGCTGAATAGCCTTGTAGACTATTTCCTTCAGACAAACTCATCTCAAGCTGTGGACATCCTGTCTTCTGTCCGGGAGCCTCATGATAAGtatCTTTTAGATAAGATGAATGAATGCATGGGCAAGCAGAGCTGTCGTCTCTCCACCATCACCCTCCTTGGTCATGTTGTTCGCAAACAGCCACCATGGATCCACAAGATCGCACGCTTCCCTCTGCTTGTCTCGCTGCTCAAATGCCTCAAGACTGACTCAGATGTAGTAGTTCTCATAACTGGTGTGCTGGTGCTGATCACTCTAATGCCCATGATTCCTCAAACCAACAAACAACTTCTTTGCGACTACTTTGATATCTTTGGACGTCTTGCTGCCTGGAACCAACGTCATCCAGGCCATGCTCAGGGAGTGTTTGCAGTCCATCTACATGCCAGCGTGTACTCTCTTTTCCATCGTTTATATGGCATGTATCCTTGTAATTTCGTTTCGTACCTGCGTGCCCATTACAGTATGAAGGAAAATGTTGACACGTTCGAGGAAGTGGTGAAGCCCATGTTGGAACATGTTCGGATACATCCTGAGCTCATCACTGGAACCAAAGACTACGAGGTTGATCCAATTAGATGGAAGAGATTTGAGCCACATGATATTGTGATTGAATGTGCCAAAATTTCACTGGATTCTAAAGAGGCGTCATCTGAAGAGGGCTACTCCTCTTTGGCGGATCACATACAGCGACGCGCTGTACACCATAGCCAATCATGTTCAGAGCTCAGTTTCCATGAAATCTCATCAGTCACACCAATAGGTGCTATTTGTCAGTCTCTCTCTAAATCACAACCTTATCTCACTGTAACCCAAGACTCAGGTTCCAGCGCACAGACCCTCAACAATCAAAGTGATGAGGTCAAATCCTCAGGGATGAAGGAGGAGCTGTGGAGCCCTTCCTCCATATGTGGGATGAGCACCCCTCCCAGTTCTAGAGGAATGTCCCCAACCACAGTTTCTGACATCTCACTTAGTGCCTCACACCTCTCAGGACGGATCCCCAGCACCCCAGGGGATGGAAAGTGGACTCTATCTCCCACCACACCCTCGGGGTCATCCCCTCTCCCATCGCTCTCAGAGGAAATAGGGCAGGCTGCCCAAAACACCAGCAGTACCCAGGCTAAGACGTGCAAAGAGGTGAAGAAAGTCACATCCAGAAGTATTAATAACAGCAGTGAGAATGGAGGTGATGCCAAGACTCCAGTGTCGTTGGCACAGCTCTCTGACATTGTCAAAAGGACAGAGGGGGAGCGAGAGGATGATACAATCAATGAGGAGATTTTGAGTCTAACCCATGGGAAACTAGACTTTGGATCTAGGCCTGGTCTGGAATCCTCATTTTCTGGCTCCTTAGACACCCTTCTCTCATCTCATCCTAATCATGAGCAGAATTTGGTATCCACACCAGACAGGGTTGAATGCTCGGCTAAAGCAGGAGAGCAGCAGCTTCCTAGGTCTCTCTGGCCGTTCACCCCCATTGAAAATGGGAAGCACAGTAAATGTTCTCTGTCTGATCTCACAAAAGAATCCATGCCTTATGAGCCACTGTTTGACCTCGCCCTGCCGAAGGTGGCATCTCTGTTTTTGGAGAGGAAGACTGCTGAGGCCTTTCGGAGGGTTGAAGGAGAAAGAGATCACCAAGATGAGATGGAAGGAGAGGATCTTTCTGTCACCTCCCCTCTGGAGGTGTTGGACCGGGTTATCCAGCAGGGTCACGACACTCATGGGAAAGTGCTGAAGAGAACTTTCTCTTCTCCAAGCCAATCATCAGACCCACACTTGAAAGGTAAACAGCATAGCAATAAAGGAAAAGgtcTTGTGCCTGCAGTGTCGGATGAGCTAGACATGTTACGCAGTCAATTGCTGCTGCTGCATAACCAGTTGCTTTATGAGAGACATAAGAGAGAGCAACATGCGCTTCGTAACCGTCGTCTGTTTGGCCGCATCGTCAACACTACTGCACTGGAAGAGCAAAATAACTCCATGaaaACGCAGCTCAAACTTCAGGAAGTTGAGATCCAGGCTGTAAAGGTAAGCCTGAAAGAGGAGCAGCGGCGCTCTGTGCACATACAGGAAGACAGAGAGGCTGTCGTGAACCAGTTACAGATTCAAATTCAGCAGTTACAGAAGGAGCGGAATGACTACTACTCAAAGATGCAGGTGCTAAAGAGCGAGTTGCAGGAGAATCAGACAAAGGCTGGCAAAATGGAGGCAGAACTGCAGAAAGCCAATAACAAAGTGTGTAATATGGGTCACATGCTCAGCCAGCTATCTATCAAGCTGAACAATAGTGAAAACATGGAGCAGCAGATGGCTTTCCTGAATAAGCAGCTGCTGCTTTTGGGTGAAGCCAACAAGTTATACATGGAAGAAATTGACCGCTTGGGCCCTGAGGCGCACAAGGAGCTGAATATGCTGCAAGCATCTTCAGTGCGGGAGGGTGAGCGTTTGAGGCAGAGCTCTCTTCAGCAGAGTCAGAGACTTGAGGCTGCACAGCAGCGTATCACAGACCTGGAGAACCAACTCACCAAGAAAGAGCAAGTCATCCGGGAGCAAAAGAAACTGCTGGACAATGTCAAACGACAGGCCACggAGCAGCTGCAGGCTTCAGAAAACAGGTATTTGGCTCAGAAGAACATCACTCAGGCATTACAAACTGAGCTGCTTGAGCTCTATAGCAAGATAGAGCTCAAAAACCTGAAAACTAATGCACCAGCAGAGTCCATTTCTGATCCCAGCAGTCCCACCAACCAGAGGCCAAATGGCAACAGTGCAGGCCCATCTGCTCCATCTCTACCGGCTGACCTGATGAAAAGAGAGGAAGGGGCGCATGTGTGTGTCAATGGTGAAATATCTGCAGCGTCTCCTCAAACACCCACAGCACTCATTAATGGCAGTCAGGAAGAAGATCTTTCCGCCCTTAGTCATTCATTTCCCTCCCTCCCCTGCCAACCCTTTGCAGTTGGCTCTTACCCCAGCACCAGAAGCTTTTTGGGTAAGAAAGCCAGAGAAATGTTCCGCAATAAGAGTGAGAGCCACTATGATGGCGACTCGCCCACCCTCACCTGCCTCTCAAAGGATCTTAAAGTTGAGCCAATCACAGACCCCACAGAGAGTTTGGAGTCCGAGGAAGCTGCTGACCAGTTTGACCTGCAGCCAATGGATAGACCCCGGGCATATAATGTTCAGAGTAGGAGGCATCAGGATCTGCGGATCATGGACTATAATGAGACCCATCATGTGCATTGATTGTACACTGCTGACATCATCGTCTGCAGATAGAAGAGGATCATTTTGGACCCAGTATTAGTATGCACTACTCTTTTTGTTAGAGTGGTTTGCAacattttagttcattttaaaagCTCTTGTACTACAAaacggccaaaaaaaaaaaacattttcgcTTGGCATTTGCCATTTAGTCACCACAGTGGCAAGAGATCATCTTGTCTTCATAAGAAAAAATGGCTTACTTTTCTCCTGTCTAATATGAATTCATTgaaattcagtattttttttttataatgggtATTCAGAGAGCAGTTGTGGTGATTTAACTGCGTGGTGGTTGGATGTTATTTGGGCCTTACTGTACTTTGCAGCAAATGTATtgatttaatcactgtatttgcTCCTGTAATGGTATCGTTCAGTTTCCAGTCCTCCTAAATTTGTCCAAGCAAAATGCTTAAGTCACTTCTTCATTTAAGCTAATGTGACTTGCACAATACTGAGTATGATCATTGCAAGCGGAGCACTGTAAATagattatgcctctgaaaaaccaaccagtcagtccgataaaaatgtgaaaaacaaaaaagaagctaTGTGGAATAGGTGAAGTAGAATCGCAAAAGACATTTCATCATCGAGGCATATGCCATAGCAGTGCTTTGTGCGCTTGGCCTATAGAGAATGATCATGTCTTGTGTTGTACTTCTAgtaatagattttatttttatgcatttaacgTTCTTTGCTGGGATTGTAGCGCCCAGTCACCAGTGCAATACTTCGCTAACACTTCATGCCAGCTCGAAGGTATGATGATGGGGAATATATAATAAACTGATTTAGATTGCTGCTTTGCAGGACCGTCAGAGCCTTGAAGAACACTGGGTCAGGCTGCTGCTGAAGCATTTGTCCAGTTGAGACCTAATGAGAAATCCGAATGACTTTGTGGTCTAAGGTGTGTCTGACGGGTGAATGTTCTTGTGTTAATGGTATACAAACACGGCCACTGCAATACTTCAACACACTAAACTCTGAAAGGAAGCTGCTCGCTGTAAGCCAGAAGGCTTATTTTCTCTCTATTATGTTCTTTCATTTCTGTCTTACGCAGGTCAGACCCCATCTGCAAGAAAAAGCTTCAGATAATGGGCTGCAGCTGGCTGAACTGAAAGCACTTCTTTTTTAATTCAGCCCTTCTTAAGATTGCTGAACTCTAGCAGAGCAATATACTCATCTCTTTCTAAAACATTGCTCTAGGGGTTTGTTTTCAGTTCAGAGTATACTGTAGATGAACATGTGAAGTGCTGTTGCGAAGAAAATAAAATCTTGGCTTCGAACTGCCAGCTGGGGAAATGGCTTTGAGAATTGAAATCTATGGAAAtcctttcagttttttttctttctagacTGTTCTTTTCACAGGTTACCATGAGTGTGATCGTACAGCTTGTGCTTTGTTTCCCTTTCACTCAGACTTTGTTTTTATACAAATACCCCTCTCAAACATTTTGTTGTTTCACGTAATGCCTTACAAAAAAAAGTAGGAAACCTGTCTGTCACCTGAAGTCGTTTTGGAAAGTTATCTTAACTATGGTACAATCAGGCGGTGACGGGTGTAACGGGTAACCAGGGACTCTATTTTGAAGTTGAGAAAACAGATTTGTGTTCTCCTACTTGCTatgatcaacaaaaaaaaaataaaaaaatatatgttttgcatAATTTTGTTGCTGTCATCAATTTTATAATGGCAATGAGGTATATGCACATGGGCTTtttatttcagtcagccagccccagggcttccggtAAATTGTCACCCCACACAAAATCGCAacttttaagatctgatttcttaaaaaaaaaaaaaacagcaatcttcACTTGCCTGGCTGAAGATATGATTaaaaagtgggtatcagaccaaacaagatgTACATCTTTCCGCGCCATGtcttttaaaatatggaaattaattttaccctaGTATTTTTATTGGAATTTCTGTGCTAGCCAGCGGCTTTTGATGGCGCCAGCGTTTAAATAGTCTTTTTAActctttttatgctttaacaaacaaatggatgcataaatctatttaactgattatatttaaattgagTTACAACACCAATGCAACATTAGGAACATTAGGAAATTGAAAATAGCTCTCaacggaagttcatcattggcaaCACTATAGGCATTGGAcgataaccgtgttcaaggtataacgtggtttggaaaagtcaaggttctAAAACCGACAAAATTCTGATaaactgttcctaaggtatgaataagatttaattttactttttttttttttttttaggactgcAGAATCTCAtgcagaaaagaaaacaaaatctgtttttgaaactaatgaaaacagcagaagtcaaatcatttgaatcatttgaattagcctaacatgtttactgttccaaaatatttaaaaatgtttcttaagttaaaatatattgtgtacaaaagttaaaaaggttatgttttttttacccagacatgtATAAAAATAGATTTGAGAGCAGTAATcttgaaaccgtgatatttatacCCAAGGTTAtaataccgtcagaatcttataccggcctatgcctacaacactagctgtgcatatagcccattgtgaATTTTATAATACTTGGTGTGAGAACTAAGAACAAAACATCTGtaaatatcagtttttttttatctccttGTATTTCCGGGTggcttccaggctggttttcctGCATGCCAACCACCAGATCCTTTTTTCTTCTTTGAGGACTTACTTCTCTGGTGCTTACTGGTGTCTTTTTCAAGGCTAGCATCGATCCCGGTTCCAACATTCTTTGTCAACGTTTGATTAGGTGTTACTGTAGATGCTGAACTTAGACGTTTTGCACTTCCTCTGATGTAGGCAGCGAGAAGGTCCAAAGTCAGTGGAATAATGCTCACAATCCCACCATAGAAATTTCTTGCTTCATCACAGCTCAGCCGGTTGATCACATTGTGTGGATAGCTGTAAAGAAAGGGGATTAAGTCAAATAATAAGCAATGATTCTTGGGAGCCTTGAGCATTATGTTACCATCTGATTTTATTTAATGAGACTCCCGCATCCTTAAAGTGGGTTAAATTCCGAAGGTTAATCATTCAGACAgcaattgtttatatttatgtaagaaGTAGTGTAATTTTACTGTTACTTAACTGTGCCCTTTGCTGACTGATGTTGCTGCTGGGGTTCAGGAGCTCTTTGCAGGTCTCCAATCCCTCACATGAAGTGTTTCTGCTGGACACTGAGGACTCCAGTTGTTTTAAAACACCTTCAAGATCAGAAATAATTTCCAGAAAGAGTAAAAAGATGCTCCTGTCAGTTGAATTGCTGCAATGGTGATTCATGTACTTTTGGACCTGCGGAAAAACAATGTTttctatttgtttaaattttacattattgATACATGCAATACATATTATTTAACAGTATTGAACCAATAATATATACACTACCGATTATAATTACACAAGTTTGCtgtaagatttgttttaaaaaaattaaaaacattttaataattaattctttaCAAATTCAAAAATGAACTAATGAATAAAATTTCAGTGTCTTCAAAAGTATGCATAGTTACTGCAACCAACAATAAAATAGTGGGTTGCTACTTGAAAATATTAGCAGTTTAATTTCCACCAGGTTAACATGACAATAAATTATGCTTAAAATATTAACATGCCATTCTTACAATTAACAACAGTTCGCTTTGATTACTCCCATTTTTTAATAATCACAGCTTTACTGGGTGCCGTGGGAACTGTATGACTttataaaactgttaataaatcATAATGACCTGTTTTATGGTGGAGACAGGCTCTGTTCTGTCCCTTGCATGTTCTCTTGAGCGCTCCAgagcatttataaatataaactgTTGTTGTTTGAAACGTTTATATTTCTGCTCGAGGAAAAGTAGCTGCTGTCTGACATCAGCCATCTCGGTTAAAGTGCTCAACCTGTTGAAGATGAATAACGTTACAGTAGtattaaaatacagaataaaCGAAGTACTGTTCATAAATaggagtaacgttaacgttaaggtAATTACCTTAAGGATATTCTACTACggctaaaacttaaaaaaaactttgttgtAAAACTAAAGAGCGGGCTTTTTCACGGAATGTAACTTTAGCCCAATTGTGTCTTCAATTTGTCAAATATTCACATGTACGTTATTCGAACTTACCTGTATTAATACTGAAGCATATCAAATACCTGTACAATCGGTGTCTTCTTTTTCTGTTTCGCATATGTTGCGTAGCAACTAGAGTTGAAGCTCGCACTCCCTCTGTTGGTGCTGAATGTGATCTGCTCATCAGCTACACATGTTACCAAGGGCAACGACAGCAACAGCTGCAGTGAGAACGCAAAACAAACTAGCCACAGCTAACGTTAGCCTACATTTCAAggtaactttatatatttttgttcttcattttcctttgaacAGATAACCGCATTAtgctatttttaatcaaataaacgcATCGTTTGCGTAAATTCCCCTTTTGTGAGGGAGCAAAGCTAAGTAAACTATTAGCCTAACTTACATAAAGAATAAACTTTGGTAACGTTACAATACCTGAAAAAATACGTTACTTACTGAGCACATCTTAAAAGAAActaacattatatattttatactagAACATGTTCGGTACATACCAGTATTTATGTATTAGATATacattatgtatgtgtgtgtgtgtgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataatatgtaatatc
>TCONS_00058954
CAGCACTTCACACCTATCTGCCACTCATGCCGTGATCTTGTGACAGCGAGACGGAGGAGTCGTTCATACATAGGCACCCCATGCTGACACCACAGGAcatcgatttctgctgtgacaaaGGCATCAGTCCTGCCCACTGTCCTGCACAACTATGGCCAAAGAGCAGCCAAGTGTGTTTGACCTCATCCCTCTTCTGGGGTCCACTGACCTACATGAGCTGGAACAGGTCAAAACCTTGCTGCAGGAAACTCTCAGTGCAGATAAAGGGACCATGTTGCTGAATAGCCTTGTAGACTATTTCCTTCAGACAAACTCATCTCAAGCTGTGGACATCCTGTCTTCTGTCCGGGAGCCTCATGATAAGtatCTTTTAGATAAGATGAATGAATGCATGGGCAAGCAGAGCTGTCGTCTCTCCACCATCACCCTCCTTGGTCATGTTGTTCGCAAACAGCCACCATGGATCCACAAGATCGCACGCTTCCCTCTGCTTGTCTCGCTGCTCAAATGCCTCAAGACTGACTCAGATGTAGTAGTTCTCATAACTGGTGTGCTGGTGCTGATCACTCTAATGCCCATGATTCCTCAAACCAACAAACAACTTCTTTGCGACTACTTTGATATCTTTGGACGTCTTGCTGCCTGGAACCAACGTCATCCAGGCCATGCTCAGGGAGTGTTTGCAGTCCATCTACATGCCAGCGTGTACTCTCTTTTCCATCGTTTATATGGCATGTATCCTTGTAATTTCGTTTCGTACCTGCGTGCCCATTACAGTATGAAGGAAAATGTTGACACGTTCGAGGAAGTGGTGAAGCCCATGTTGGAACATGTTCGGATACATCCTGAGCTCATCACTGGAACCAAAGACTACGAGGTTGATCCAATTAGATGGAAGAGATTTGAGCCACATGATATTGTGATTGAATGTGCCAAAATTTCACTGGATTCTAAAGAGGCGTCATCTGAAGAGGGCTACTCCTCTTTGGCGGATCACATACAGCGACGCGCTGTACACCATAGCCAATCATGTTCAGAGCTCAGTTTCCATGAAATCTCATCAGTCACACCAATAGGTGCTATTTGTCAGTCTCTCTCTAAATCACAACCTTATCTCACTGTAACCCAAGACTCAGGTTCCAGCGCACAGACCCTCAACAATCAAAGTGATGAGGTCAAATCCTCAGGGATGAAGGAGGAGCTGTGGAGCCCTTCCTCCATATGTGGGATGAGCACCCCTCCCAGTTCTAGAGGAATGTCCCCAACCACAGTTTCTGACATCTCACTTAGTGCCTCACACCTCTCAGGACGGATCCCCAGCACCCCAGGGGATGGAAAGTGGACTCTATCTCCCACCACACCCTCGGGGTCATCCCCTCTCCCATCGCTCTCAGAGGAAATAGGGCAGGCTGCCCAAAACACCAGCAGTACCCAGGCTAAGACGTGCAAAGAGGTGAAGAAAGTCACATCCAGAAGTATTAATAACAGCAGTGAGAATGGAGGTGATGCCAAGACTCCAGTGTCGTTGGCACAGCTCTCTGACATTGTCAAAAGGACAGAGGGGGAGCGAGAGGATGATACAATCAATGAGGAGATTTTGAGTCTAACCCATGGGAAACTAGACTTTGGATCTAGGCCTGGTCTGGAATCCTCATTTTCTGGCTCCTTAGACACCCTTCTCTCATCTCATCCTAATCATGAGCAGAATTTGGTATCCACACCAGACAGGGTTGAATGCTCGGCTAAAGCAGGAGAGCAGCAGCTTCCTAGGTCTCTCTGGCCGTTCACCCCCATTGAAAATGGGAAGCACAGTAAATGTTCTCTGTCTGATCTCACAAAAGAATCCATGCCTTATGAGCCACTGTTTGACCTCGCCCTGCCGAAGGTGGCATCTCTGTTTTTGGAGAGGAAGACTGCTGAGGCCTTTCGGAGGGTTGAAGGAGAAAGAGATCACCAAGATGAGATGGAAGGAGAGGATCTTTCTGTCACCTCCCCTCTGGAGGTGTTGGACCGGGTTATCCAGCAGGGTCACGACACTCATGGGAAAGTGCTGAAGAGAACTTTCTCTTCTCCAAGCCAATCATCAGACCCACACTTGAAAGgtcTTGTGCCTGCAGTGTCGGATGAGCTAGACATGTTACGCAGTCAATTGCTGCTGCTGCATAACCAGTTGCTTTATGAGAGACATAAGAGAGAGCAACATGCGCTTCGTAACCGTCGTCTGTTTGGCCGCATCGTCAACACTACTGCACTGGAAGAGCAAAATAACTCCATGaaaACGCAGCTCAAACTTCAGGAAGTTGAGATCCAGGCTGTAAAGGTAAGCCTGAAAGAGGAGCAGCGGCGCTCTGTGCACATACAGGAAGACAGAGAGGCTGTCGTGAACCAGTTACAGATTCAAATTCAGCAGTTACAGAAGGAGCGGAATGACTACTACTCAAAGATGCAGGTGCTAAAGAGCGAGTTGCAGGAGAATCAGACAAAGGCTGGCAAAATGGAGGCAGAACTGCAGAAAGCCAATAACAAAGTGTGTAATATGGGTCACATGCTCAGCCAGCTATCTATCAAGCTGAACAATAGTGAAAACATGGAGCAGCAGATGGCTTTCCTGAATAAGCAGCTGCTGCTTTTGGGTGAAGCCAACAAGTTATACATGGAAGAAATTGACCGCTTGGGCCCTGAGGCGCACAAGGAGCTGAATATGCTGCAAGCATCTTCAGTGCGGGAGGGTGAGCGTTTGAGGCAGAGCTCTCTTCAGCAGAGTCAGAGACTTGAGGCTGCACAGCAGCGTATCACAGACCTGGAGAACCAACTCACCAAGAAAGAGCAAGTCATCCGGGAGCAAAAGAAACTGCTGGACAATGTCAAACGACAGGCCACggAGCAGCTGCAGGCTTCAGAAAACAGGTATTTGGCTCAGAAGAACATCACTCAGGCATTACAAACTGAGCTGCTTGAGCTCTATAGCAAGATAGAGCTCAAAAACCTGAAAACTAATGCACCAGCAGAGTCCATTTCTGATCCCAGCAGTCCCACCAACCAGAGGCCAAATGGCAACAGTGCAGGCCCATCTGCTCCATCTCTACCGGCTGACCTGATGAAAAGAGAGGAAGGGGCGCATGTGTGTGTCAATGGTGAAATATCTGCAGCGTCTCCTCAAACACCCACAGCACTCATTAATGGCAGTCAGGAAGAAGATCTTTCCGCCCTTAGTCATTCATTTCCCTCCCTCCCCTGCCAACCCTTTGCAGTTGGCTCTTACCCCAGCACCAGAAGCTTTTTGGGTAAGAAAGCCAGAGAAATGTTCCGCAATAAGAGTGAGAGCCACTATGATGGCGACTCGCCCACCCTCACCTGCCTCTCAAAGGATCTTAAAGTTGAGCCAATCACAGACCCCACAGAGAGTTTGGAGTCCGAGGAAGCTGCTGACCAGTTTGACCTGCAGCCAATGGATAGACCCCGGGCATATAATGTTCAGAGTAGGAGGCATCAGGATCTGCGGATCATGGACTATAATGAGACCCATCATGTGCATTGATTGTACACTGCTGACATCATCGTCTGCAGATAGAAGAGGATCATTTTGGACCCAGTATTAGTATGCACTACTCTTTTTGTTAGAGTGGTTTGCAacattttagttcattttaaaagCTCTTGTACTACAAaacggccaaaaaaaaaaaa
>TCONS_00058955
AGGGCAACGACAGCAACAGCTGCAGTGAGAACGCAAAACAAACTAGCCACAGCTAACGTTAGCCTACATTTCAAgACACATTTTTAGCCTTCCTTTGCTGACCTCTCGGTGTCTCGTGGAGCATTGCAGTGATGGATTCAGCTGAAAGGCCCCTCAGAATCCCCCCTGAAATGGTCATTTATGCAGAGAAACATGACATATTTCACCTGATCCAGACACTAGTGAGAAATCTGATGGTGGACAAACCAGATGATCCCATTCAATACCTGATTAACTTTCTGGAAAGGGACAATGTTGATGTTCCTAGAATCATATTACTGGGTCCTCCAGCATCAGGGAAAAGAACCGTAGCTAAAAAGTTATGCGAACACACACAGGCTATCCATATAACTTTTAGCGATATTTTAAAAGATGACAGTGACCTGACAAGGGCTGCACAGAGTTATTATGACAAAAAACAGAATGTCCCCAAAGACCTCTGGATCCAACTGATTCAACAACATCTATCAAAACCTGACTGTGTTCAGCGGGGCTGGGTTTTGGAAGCCATTCCCAAGACGCAAGACGAGGCGCTATGTCTACAAGAAGCAGGCATCACCCCAGATCACGTTGTGATGCTGGAAGCTCCTGATGTCGTCCTGATTGAAAGGAGCTCAGGCAAGAGGATAGACCCTGTCACAGGAGaTGTATATCATGTCACCTTCATGTGGCCTGAGAGTGAAGAGGTTGCACGGCGTTTAGAAACACCCAGGACTCTTATGCCAGTTCAAGTTATGAGCCAAAAGCTGCAGAAATACCACACAGAAGCTCACGCTCTGAAGCGCACCTACCACAACTGCCTGAAGATCATCAATGCTGACCAGCCTCATGTAGATGTATTTTCACAAGTGCTGAACTTCATCTGTACTCCACGTCACTCTCCCTCACCCTACACTCCCAGAATCCTGCTGTTTGGACCACCAGGTGCAGGAAAAAGTCTGCAGGCAAAACTAATTGCTCAGAAATACGGCATCATCAACATTTGTTGTGGTGAGCTTCTGAAGGCTGTGTCAGCTGATGAGAGCCATATGGGGGAGCTCATTAAACCGTACCTGGAGTCAGAACAGCAAGTGCCGTCCAGTATAGTTCTGCGGGTCCTTACAGAGAGACTGAGCAGAATGGATTGCACCGCACGGGGCTGGGTGCTTCATGGCTTTCCTCGAGATGTTGAAGAGGCAGAACTTCTCCACAAGTCTAATTTCACACCAAACAGGGTTTTCTTCTTGGAGATTACTGATGACATCGCTATCGAAAGGCTAGCACTTAGGGCTGTGGATCCTGTGACAGGAGAATGGTACCACAGCGTGTATAAACCTCCTCCTGGTCCGGAAGTTCAAGCACGGCTTCGGTTTAACCCACAGCATTCAGAGGCACAGCTGTTAATGAGGCTTAAGGAATACTGGAGCCAAACAGTGCGCCTGCAGGCCTTCTACCCACAGGCAGTGTACATCAACGCTGACCAGGACCCACACACTGTGTTTGAGTCACTGGAGAGTCGGCTAGTGGGCCAACTACCTAAAGTCCTGTCTAACCAGCAAACAAATGAGAACTAATGCTCTTGAAACACTTTAAAAAAGAGATACACCACCCAAAAACTGAAAACTTGTGTAATCACAAATTGTTTGACTTATGGAACacaaatatagatttaaaaatagAGCAATTTGAAAATCCAAACAGTGGATGAActtaaaataaacatgcaaaaagtAACAATGGTAATCTAAAATCTTTAGATGTTGACTTGAAAAAGgaaaactaatattattatttttagttttacactATAAACTATTTCTTCCAACTTTTGCAAATTTGACATTTGACATAGAGATTAGCACAATGTGAAAGAAGGGATGTGACAGTATAGAGGTGCTGTATGTCATTTCTTTTGTGAGTTTCACTTACATGAGTCTTCATAACATACTAATGATTAGGTCAAATGTTAAATCACAGTATCATCAACTTATTAGTGGAAAAGTGGCACATTCATCCACTGTTGTTTGTACTAAAATGAAGGATTTtcctaaataaaatacatttgccTAGCCCGGCCTCTGAACATAGCCATCACTGGGGTCATAaccaattataataaaatgtatgaaCGAGTTGTTCTCTAAATTATCCTCTAAATAAAAGCAGTCATGAATTGCTGTGGGATCACAATGGAAGTCACATGACAGTTGCCTGAAAATGATGGTATATAGAGGAAAAAAATGAAGGTCTTGGTGTTTTTATTACACACAGTTATCATTTCAAAAGGCACTGATTAATCTACTTAGGTTATAGATGTATTAATGCCATGTtggtttagtgtggtttaaagtaTCTGTCCAAAAATTCTAAAAATCCAAAAGGAAAGAAGCTTATTTACATATGGGAATGCATGAAaagtgattaaaatattttttgggtgGATTATCTCTTTAATCATTCACACAGATCAATTTAATACCAATACCAATTCTTTATCAATACATAATGCAAAAGTTTGATAGGCTACTAAAAAACTGCTTATGAATTTGTCTTGGTCTTAGCTCTAATTTAATAAACACTACATGTCTCCAAA

Function

symbol description
tsc1a Acts upstream of or within several processes, including cilium assembly; pronephros development; and regulation of TOR signaling. Located in Golgi apparatus. Is expressed in notochord; polster; pronephric duct; and somite. Human ortholog(s) of this gene implicated in intellectual disability; lymphangioleiomyomatosis; tuberous sclerosis; and tuberous sclerosis 1. Orthologous to human TSC1 (TSC complex subunit 1).

GO:

id name namespace
GO:0051726 regulation of cell cycle biological_process
GO:0048793 pronephros development biological_process
GO:0046627 negative regulation of insulin receptor signaling pathway biological_process
GO:0007368 determination of left/right symmetry biological_process
GO:0060271 cilium assembly biological_process
GO:0032006 regulation of TOR signaling biological_process
GO:0032007 negative regulation of TOR signaling biological_process
GO:0005794 Golgi apparatus cellular_component
GO:0033596 TSC1-TSC2 complex cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-9111 Acts upstream of or within several processes, including cilium assembly; pronephros development; and regulation of TOR signaling. Located in Golgi apparatus. Is expressed in notochord; polster; pronephric duct; and somite. Human ortholog(s) of this gene implicated in intellectual disability; lymphangioleiomyomatosis; tuberous sclerosis; and tuberous sclerosis 1. Orthologous to human TSC1 (TSC complex subunit 1).
ZDB-GENE-050522-275 Predicted to enable adenylate kinase activity; cytidylate kinase activity; and nucleoside diphosphate kinase activity. Predicted to be involved in nucleoside diphosphate phosphorylation and nucleoside triphosphate biosynthetic process. Predicted to act upstream of or within nucleobase-containing compound metabolic process and phosphorylation. Predicted to be located in cytosol. Predicted to be active in cytoplasm. Is expressed in Kupffer's vesicle; otic vesicle; pronephric duct; pronephric mesoderm; and sensory system. Orthologous to human AK8 (adenylate kinase 8).

Ensembl:

ensembl_id ENSDARG00000026048 ENSDARG00000030961

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00058953 False 8752 mRNA 0.41 22 29652198 29672144
TCONS_00058954 False 3687 mRNA 0.49 22 29652513 29667421
TCONS_00058955 True 2611 mRNA 0.41 14 29671681 29711948

Neighbor

gene id symbol gene type direction distance location
XLOC_030150 NA coding upstream 86373 29560059 ~ 29565825 (+)
XLOC_030149 NA coding upstream 409038 29241794 ~ 29243160 (+)
XLOC_030148 CT956057.3 coding upstream 437552 29214530 ~ 29214646 (+)
XLOC_030147 dpp7 coding upstream 474926 29159777 ~ 29177272 (+)
XLOC_030146 stxbp1b coding upstream 649876 28972935 ~ 29002322 (+)
XLOC_030152 ddx31 coding downstream 2838 29714786 ~ 29745566 (+)
XLOC_030153 NA coding downstream 72224 29784172 ~ 29792624 (+)
XLOC_030154 thy1 coding downstream 82110 29794058 ~ 29803293 (+)
XLOC_030155 usf1l coding downstream 91432 29803380 ~ 29817848 (+)
XLOC_030156 f11r.2 coding downstream 108318 29820266 ~ 29825846 (+)
XLOC_030145 NA non-coding upstream 733237 28916519 ~ 28918961 (+)
XLOC_030141 CR559930.1 non-coding upstream 826058 28824612 ~ 28826140 (+)
XLOC_030159 NA non-coding downstream 190205 29902153 ~ 29988431 (+)
XLOC_030160 mir100-2 non-coding downstream 278199 29990147 ~ 29990221 (+)
XLOC_030161 dre-let-7a-4 non-coding downstream 278504 29990452 ~ 29990544 (+)
XLOC_030162 dre-mir-125b-2 non-coding downstream 286814 29998762 ~ 29998847 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000339_05337234_05360601 NA coding CI01000339 null 5337234 ~ 5361449 (+)