XLOC_030161 (dre-let-7a-4)


Basic Information

Item Value
gene id XLOC_030161
gene name dre-let-7a-4
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 29990452 ~ 29990544 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00058975
GCGATGTCTCGGGATGAGGTAGTAGGTTGTATAGTTTAGAGTTACAACACGGGAGATAACTGTACAGCCTCCTAGCTTTCCTCGAGCAGACGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000082755

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00058975 True 93 miRNA 0.49 1 29990452 29990544

Neighbor

gene id symbol gene type direction distance location
XLOC_030160 mir100-2 coding upstream 231 29990147 ~ 29990221 (+)
XLOC_030159 NA coding upstream 2021 29902153 ~ 29988431 (+)
XLOC_030158 ubash3ba coding upstream 93684 29851433 ~ 29896768 (+)
XLOC_030157 f11r.1 coding upstream 141680 29831195 ~ 29848772 (+)
XLOC_030156 f11r.2 coding upstream 164606 29820266 ~ 29825846 (+)
XLOC_030162 dre-mir-125b-2 coding downstream 8218 29998762 ~ 29998847 (+)
XLOC_030163 timm8b coding downstream 99171 30089715 ~ 30090506 (+)
XLOC_030164 BX897688.1 coding downstream 175912 30166456 ~ 30166572 (+)
XLOC_030165 adamts15a coding downstream 188466 30179010 ~ 30209068 (+)
XLOC_030166 zgc:158412 coding downstream 394010 30384554 ~ 30391820 (+)
XLOC_030153 NA non-coding upstream 197828 29784172 ~ 29792624 (+)
XLOC_030150 NA non-coding upstream 424627 29560059 ~ 29565825 (+)
XLOC_030149 NA non-coding upstream 747292 29241794 ~ 29243160 (+)
XLOC_030174 BX276103.2 non-coding downstream 732585 30723129 ~ 30727648 (+)
XLOC_030177 NA non-coding downstream 789886 30780430 ~ 30974079 (+)
XLOC_030178 NA non-coding downstream 961679 30952223 ~ 30954521 (+)

Expression


Co-expression Network