XLOC_030165 (adamts15a)


Basic Information

Item Value
gene id XLOC_030165
gene name adamts15a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 30179010 ~ 30209068 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00058979
atgtttttgttgcTAAGGTCAGTTCTTCTTGTAAACGTGTTCTACGCTCAGTGGAGAATTGTGAATTCAATGCAGAGCCAGTTATGCGTGCCCATCAGAATGGATCATGTAAAGAACAGTTTAGTCGATGATGAGGACAGTATTTTGCCGCGCAAGGCTGTATTTAAAATAAGTGCGTTTGAACAAGATTTTGTACTCGAATTGAGGTCGGACTCCAGCTTCATTGCTCCAGGTTTCTCAGCGCGCACAGACTCAGCTGCGCACAATTCCGCGCACGGTGAAGATCTGAGCCGGTGTTTTTATGCCGGTGAGGTGAATTCTGATCCCTATTCCTACGCTGCGCTCAGCTTGTGCAAGGGTCTCCAGGGCGCATTCGGATACGACGGCTGGGAATATTTCATCAAGCCGGCTTCTAACAATACCGACCGGGACAACGAAGCCGCGCATCTCATCAGACGCAGATCTAACGCCGATCTGAGTGGAAACTCCACGTCAAGGTGCGGCGTGGACAGCAATGCGACTCAAACCGTTGCACAGTCCCTAGCGAAGTTTAAGCACCTGAAGGAACAACACATGAATAACGTCACTATGTCATTTCTGAGAAACCGCTCGAAAAGATTCGTCTCCATTCCGCGTTATGTAGAGACATTAGTGGTGGCCGATGAATCCATGGCCAAATTCCACGGTGACGACCTCAAGCATTATGTGCTGACCTTAATGTCTGTGGCGGCGAAGCTTTACAAGCACCCCACCATTCTCAACTCCATCAACATCGTGGTTGTCAAGTTTATGGTGATTAACGAGGAAGAGAAAGGACCCAAGGTTTCCGGGAACGCGGCGATGACCCTGCGTAACTTCTGCACCTGGCAGAAGAAGCTGAACAAAAACAATGACAAGCATCCGGAGTACTGGGATACGGCGATCCTCTTCACTAAACAGGACCTGTGCGGATCCTCGACGTGTGACACACTGGGTATGGCAGATGTTGGCACCATGTGTGATCCCAAGAGAAGCTGTTCTGTGATTGAGGATGATGGCTTGCCATCTGCCTTCACTACTGCCCATGAGCTTGGACATGTCTTCAATATGCCGCATGATAATGTTAAGGCATGTGAGGAGGTTTTTGGAAAGCTGCAGGACAATCACATGATGTCCCCTACTCTAATCCGAATCAATCGCACCAGTCCATGGTCCCCATGCAGTGCTGCCATTATCACAGACTACCTGGACAGTGGACATGGTGATTGTCTGCTGGATCAACCAGAGAAACCACTGGCTCTTCCAGACGTGCTTCCTGGTGCATCGTATGGTTTAGAGCGGCAATGTGAACTTGCCTTCGGTGCTGGATCAAAGCCATGCCCATTCATGCAGGCACCATGTCAGCGCTTATGGTGTACAGGGAAAACCCGCGGACAACTAGTGTGCCAGACTCGACACTTTCCATGGGCAGATGGAACCAGCTGTGGGGACGGACAGCTCTGTATGCGTGGAACATGCATAGACAAACAGGAGCTCCTCAAAACTAAGGTGGATGGCAAATGGGGTAAATGGGGGCCATTTGGTAGCTGCTCCAGAACTTGTGGAGGAGGAGTTCAGCTGTCGAAGAGAGAGTGTGACAATCCTGTGCCAGTCAATGGAGGGAAATACTGCCAGGGAGTGAGGGTCAAATACCGCTCTTGCAACCTTTCACCATGCCCTGACACAGGCAAGAGCTATCGTGAGGAGCAGTGTGAGGCTTACAATGGGTTCAGTCTGAACACTAACCGGCTTACCTCTTCTGTGGTGTGGGTGCCCAAATATTCTGGTGTTTCGGCCAAAGATATGTGCAAGTTGATCTGCAGGGCAAACGGAACGGGCTATTTCTACGTTCTTGCACCCAAGGTTGTTGACGGTACACCTTGTTCTCCTGACTCCTCATCAGTCTGCGTCCAAGGTAAATGCATCAAGGCAGGCTGTGATGGAAAACTGGGATCCAACAAAAAGTCTGACAAGTGCGGTGTCTGTGGAGGAGATAACAAGAACTGCAAGAAGGTTTCAGGCCTTTTCACCAAGCCTATGCATGGTTACAATTTTGTGGTCATGCTTCCCATGGGATCCTCCAACATCGACATTAGGCAGCGTGGCTACAAGGGCATCACAAGCGATGACAACTATCTTGCTGTCAAAAACAACCAGGGCAAATACTTGCTGAATGGAAACTATGTAGTTTCAGCCATGGAGAAGGATATCCTGGTGAAGGGGAGTCTGCTGCGCTATAGTGGAACGGTTGGGTCTTCAGAAACTCTACAGGCTGTGAAGCCTCTGGGTGAAGCTCTGATAATTGAAGTGCTTTCTGTGGGCCAGATGACACCACCACGTATCCGCTATTCTTTCTACTTGCCACGGGAGAGCAAAGATAACAAGGcacaaaagaaagaagaaaaagcaCGTGCAGAAAACAGCATTCTTAGGGAAGAAGGTGGAGTCAATAAAGGTGGAAAAGAAGCAGATATTCTCAAGGACAAAATCGCACCTGCATATGTTAAAGACATCGCATCAAAACCAGGGAAGTGGGTGGCAGCAGGGTGGGATGTCTGTTCGGTTACTTGCGGTAATGGACTCCAGAGGAGAATGGTGCAATGTCTTGGGGGAGATGGTGGGCCTGGGGTGGACTGCGAGCCTAGCCAAAAACCGAGTGCTATTCAGGCATGCGGAGACCCTTGTCCTATGTGGGATGTGGGCGACTGGTCCCCCTGCTCCAAGACCTGTGGGAAGGGCTTCAAACGGCGACTGCTTCGCTGCATTACAACTGTGGGGAAGTTGCTTCCCAGGGAGAAGTGTGTGGACAAGAAGAAGCCACAGGAGCTGGACTTCTGTTCATTAGCACCTTGTAAATAA

Function

symbol description
adamts15a Predicted to enable metalloendopeptidase activity. Predicted to be involved in extracellular matrix organization. Predicted to act upstream of or within proteolysis. Predicted to be located in collagen-containing extracellular matrix and extracellular region. Predicted to be active in extracellular matrix. Is expressed in several structures, including Meckel's cartilage; digestive system; heart; pleuroperitoneal region; and thymus. Orthologous to human ADAMTS15 (ADAM metallopeptidase with thrombospondin type 1 motif 15).

GO:

id name namespace
GO:0030198 extracellular matrix organization biological_process
GO:0006508 proteolysis biological_process
GO:0031012 extracellular matrix cellular_component
GO:0062023 collagen-containing extracellular matrix cellular_component
GO:0004222 metalloendopeptidase activity molecular_function
GO:0008237 metallopeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060526-203 Predicted to enable metalloendopeptidase activity. Predicted to be involved in extracellular matrix organization. Predicted to act upstream of or within proteolysis. Predicted to be located in collagen-containing extracellular matrix and extracellular region. Predicted to be active in extracellular matrix. Is expressed in several structures, including Meckel's cartilage; digestive system; heart; pleuroperitoneal region; and thymus. Orthologous to human ADAMTS15 (ADAM metallopeptidase with thrombospondin type 1 motif 15).

Ensembl:

ensembl_id ENSDARG00000029124

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00058979 True 2877 mRNA 0.50 8 30179010 30209068

Neighbor

gene id symbol gene type direction distance location
XLOC_030164 BX897688.1 coding upstream 12438 30166456 ~ 30166572 (+)
XLOC_030163 timm8b coding upstream 88504 30089715 ~ 30090506 (+)
XLOC_030162 dre-mir-125b-2 coding upstream 180163 29998762 ~ 29998847 (+)
XLOC_030161 dre-let-7a-4 coding upstream 188466 29990452 ~ 29990544 (+)
XLOC_030160 mir100-2 coding upstream 188789 29990147 ~ 29990221 (+)
XLOC_030166 zgc:158412 coding downstream 175486 30384554 ~ 30391820 (+)
XLOC_030167 stk36 coding downstream 183080 30392148 ~ 30411165 (+)
XLOC_030168 hmbsa coding downstream 308968 30518036 ~ 30534426 (+)
XLOC_030169 dpagt1 coding downstream 379788 30588856 ~ 30595372 (+)
XLOC_030170 hinfp coding downstream 387409 30596477 ~ 30612729 (+)
XLOC_030159 NA non-coding upstream 190579 29902153 ~ 29988431 (+)
XLOC_030174 BX276103.2 non-coding downstream 514061 30723129 ~ 30727648 (+)
XLOC_030177 NA non-coding downstream 571362 30780430 ~ 30974079 (+)
XLOC_030178 NA non-coding downstream 743155 30952223 ~ 30954521 (+)
XLOC_030185 CR759893.1 non-coding downstream 1339244 31548312 ~ 31548787 (+)
XLOC_030191 NA non-coding downstream 1695779 31904847 ~ 31912078 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000339_05655376_05675186 ADAMTS15A coding CI01000339 null 5655179 ~ 5675583 (+)