XLOC_030167 (stk36)


Basic Information

Item Value
gene id XLOC_030167
gene name stk36
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 30392148 ~ 30411165 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00058981
CGTTGCTAGgcgctttttgtttttgttcctctgGACAGCAGCGCACGTCAAACTTTCTGAAGTTTGCTCAATCTTTGCGATCGTGTTAATCTTAAACTCCGTTTATCTTGATGACACCTACTAGTATTGGGTTTATGTTTAATTCTGTGCTCGGAAGTAGGAATGAAAATATAGACGTTGTTTTGCAGTAACGTTAGTCATAAGGATCAAATGAGAAAGTTTCCGCTGTTCACTAGCTTACCCTACTGCTTCGTTTAGCCCTAGCCTGTCATGCTTTCATTTGCTGTTCACTTGCGAAACGATCAATGAGGAGAAAACGGTCTAAGTTATGTGCTTAGCGGTACGTTTTATTCACTGAGCAACGTTTGTGCGTTTTTGCAACGTTAGTTACCTGTAAAGTCTTCGTCTCTGTCAACGTCGCTGGAGATGGATCAGTACCATATTTTGGAGGTTATCGGAGAAGGGTCATTCGGACGAGTGTACAAAGGTCGCAGGAAGTTCAGCGGCCAGGTTGTGGCTTTGAAGTTCATTCCCAAAGTTGGCCGCTCAGAGAAGGACCTGCGCAGTTTGAAAAGAGAGATTGACATCATGAGGGGGCTTAAGCATCCCAACATAGTGCTGCTTTTAGACAGTTTTGAGACAGAGAGGGAGGTGGTGGTGGTGACAGAGTATGCAGAGGGGGAACTGTTTCAGATCCTGGAGGATGACGGGAGTTTACCTGAGAAGCAGGTGCGTGAAATAGCCTGCCAGCTTGTCTCTGCCTTGTATTATCTCCACTCACATCGCATTTTACACCGTGACATGAAACCACAAAACATCCTGCTGGGAAAAGGAGGAGTCGTGAAGCTGTGTGACTTTGGATTTGCTCGTGCCATGAGTGTGTCTACTTTGGTGTTGACTTCTATTAAGGGAACGCCTCTCTACATGTCTCCGGAATTAGTAGAAGAAAAGCCTTATGACCACTCGACTGACCTTTGGTCTCTGGGCTGCATCCTCTATGAGCTCCACACGGGGGCGCCTCCGTTCTACACCAACTCCATCTTTCAGCTGGTGCAGCTCATAGTGAGAGATCCAGTCAAATGGCCAGACAACATGAGCCAAGACTGCTTGAGTTTTCTGAAGGGATTGTTGATGAAAGAGCCAGAGAAGAGACTGTCATGGCCTGACCTGCTCCATCACCCTTTTGTTGCAGATGGAGTTCTGATGGTGTCAGATGAAGGTTCGAGTAACCCGCTCACTGTTCCACCCAGTCCAGACGTCCAGGCCCTCAAACACCAGCAGGTCGCAGAAAAAACAACAGTGCGCAGCGGAGAAGGCAAACTACTCGGCAAAGCCAGAGAGCTTCGAGAGAAAGAGAAGACTAACAGACGGGAGGTTGCGAGTGGAAGTGCTGCTCGCTGTAAGACAGCTTCAGCTGGAGGAGCATCCAACACCGGCCATTCATTGGGCAGCACCTTTTCAGTGTATCAAAATTCATCTCAGCCAGCAACCAATCGGCATCAAGCAAATGACAACAGTGTTACCAGGGCACGCTCAGCTCCACATAAAGGTCAGATCAGTAGAGACTATGCGAGGGAGTTTCCTTCAGTAGAGGTGGGACCCCGACAGTTTCTAAAGCGCCCTGGACATGAGCAGGATATGGACAGTGATTATGAGTGGCAGCGGTTGGTTGAATTGAGCGATCAGGGACCCGTGAATGCTTCTATCCTTCAGGGGTTAAAGATCAAGCTTCTGCAAGCCAAAACCCAGCTGCTGGTCAGGAAGGGTGAGGAGACCTCTTCAATTCTACTGCCACTGAAGGTCTTGAGAAACATTGTTCAGGGCTGCCGGATTGGAGATGTTGAAACTGTGGGAAAAGAGCTGGAACTGCCTCATCTTCTGTTCAGCCTTATTGAGGACGTCCTGAACATTCCAGATCTGATGCAGGAGTCGCAGGGTGAGACAGTATTGGCAGATCTGATGAGTGTCCTCATAATGTACCTGGAAAAGAGCCCGGGCTGGGAGATAAAGGGCAGAAGAGCTGAGGATCTCTGTCAgctatttatttcagtgtttctcAGCGGAGACCCAAAGCGCTCAGCGCTTTTGGCAGCAGCAGTCTTAACCTTGTTCACACAGCGCGGTGTGTCTGTGAATGTCGGTATAGAAAAGCTCACGGCCGTTTTGGGGGATGTTTTGACATACACAGAGgcTCATAACCCCTTACCTGCAGGTTGGGGCCTGTGTGATGGCCTTCTGTCACTGATTCTCCACAGGCTAGCTGAGTGTGAGAGCAGCTCACTGCTCGACTTTCAGCAGTCAGATCTGTGGCCCTGCCTGTGGGCTAAAGTGAACATCATGCTGCAAAACACACCATCCCAAAGCTGCCATTTCTCTCCTAATGGTCTGTATATGTTCCTCTCTCTGGCTTTATTGCTTTTCTCCAGCGATCCATACACCTGTGTGACTCTCCTATCAGATAACACCACAAACTGCTCCTCCACCCTCGGGCACCTTCTCACCACCAGTTGCAGCGCCTCATTGCTTGAACGTGGTCTTTTCTGGGGCGACTCAGAAATAAACAGCCTATCAGTGATGAGCTGTCATCTCCTCTGCATCCCCTTCTCTCTGGACTTGCCCCTGGAAAAACATCTGTCTGTTCTCCAGTCATATCAAAGCTCAAATATTGTTGCAGGTCTAGTACAGATGATTCAGACTATTCCTATTGCCTTGGTGGAGCTTCCGTTGTGTCTTCTGAATCGTCTCCTGCTATCTGACCCACAACACACCACTCCGTGCCTTATCACTGCCGCCCAGGCCTCCGCTTTCCTCCCGCACGGCACAGAAAGCTCAGACAATGGAGCAGACCACACTCAGACTCAACTAAAGCACTCTGGGAATGGTGTTGAGCGAAGTAAGAGCAACGGAATTGTAAAGAAAACCAAGATTGATCATATCAAAGGAGACATCAAATCAAAAAAGAGCTTAGACCGACCCACAGGCGACGTAGATGCATCCAGGGACAAAAACAGTTCTCAAAACGCACCATCCAGAAATATTCGCCAAACCAAAGTCAAGAGTCAAGCCAAAACATATCCAACGAAGGCCATGGAGCATCTTAGAGATGCATCAAAGATAGGTCATATAGAGGAGCTCATGGACAGTCTGGAGATTCATGGGAGTTCTGCAGGACTCTCCCCTCAGCAAGGCTGCGGGATCAGCATGCTCATAGACAGTCTGGAGGAGTTCAGAAGAAGTGGCGATCGCCCTAAGACCTCGATTCGATCCTCGCCTGAGGAGGCCAGAACAGCAGGTTCTCTGTTGGCTCTGCTTCTACAAAGTGAAGCTCTCAGTGGGTGCGCAGTAGAACTTCTCATCCTTCTCTCTCTACTAACACGTCATCCCACCTATCAGTCGTCCTTCTTTCTTCCAGTCGAATTCACCCAACTGAGACTCGCATTGCTCCACCGAGATGATGGAATCCGAGCCGCCTGCTGTAGCTTGCTGGGCCACCTGGGTTTATGTGTGATACGGGTTATCAACGAACCAAAATTTGACCTGTTCCAGGACCTGTTAGGTTGCCTATGCGATCCTGCCCCGTCTGTTCGTAGAGCGGCCTGCAAGGCTGTGGGAAACTGGTTGAATGAAATCAGAAAAACCAGTGACAATATCCCTAGCAAAGGTCTCAAGAGTACAACTGACATGCAGACATGGTCAGTACAAGATAAACCGAGGAGGACGGAGGGCGTCAGGTATATGGAGGCGGACGTATGGATGCAGCTCGCCATAGGAGCCGCTCGTCCTCTGGTGTCTCTGCTGTCAGATGCTGATAATGTCATTCGACAGCACTGCTGTGGGGCCTTGGCTAATCTGGCTGCCTTCAGTGGAGGAGATGGAGCTCTTCTCAATGCAGACGCTCCAGGCTTGATTCTCCAGACTGCCTGTAATGATTCCCATCATGCAGTGCGACGGGCAGCTGTGGCCACTCTGCGTGTGTTTAGCCAGCAAAACACATTACTGCAGGCTCTGAGGTCTCTAGACGCGGGAAGAAAACTCTGTCGCTCATCCCAAAGCTCTTTATTTCAGAGGGATTATCAATGGCTTGTCAGCAAGTTGGACGGGTCAGTCGAAGGAAAAACATAAATGTCAGCTTCATAGTTTGTTTGTGAGGAAAAGGACATCATTTTGCATGATCTAAATATGGTTTGCTGGCTGGGAAAGCTTGctggtttttatgtttatttgatcTGTGATCAAAAGGTTCTGACTGAAATTGAACGTGTTGTGTGAAAATGATctaaataataatgtgataaGTGACTAAATAACATCTGAAAAATAAGAGagaattttacaataaaatgtacattactatctatttcacatttaatgtttttgatgtaaataattgtatttttcattCTTGTAAATTGTATTTGAACCTGGGGATTTTGATTGTTCATTTTCTGCTCATTAAAATGCACTTGGCTTATTT
>TCONS_00058982
TGCTTTCATTTGCTGTTCACTTGCGAAACGATCAATGAGGAGAAAACGGTCTAAGTTATGTGCTTAGCGGTACGTTTTATTCACTGAGCAACGTTTGTGCGTTTTTGCAACGTTAGTTACCTGTAAAGTCTTCGTCTCTGTCAACGTCGCTGGAGATGGATCAGTACCATATTTTGGAGGTTATCGGAGAAGGGTCATTCGGACGAGTGTACAAAGGTCGCAGGAAGTTCAGCGGCCAGGTTGTGGCTTTGAAGTTCATTCCCAAACGATCCATACACCTGTGTGACTCTCCTATCAGATAACACCACAAACTGCTCCTCCACCCTCGGGCACCTTCTCACCACCAGTTGCAGCGCCTCATTGCTTGAACGTGGTCTTTTCTGGGGCGACTCAGAAATAAACAGCCTATCAGTGATGAGCTGTCATCTCCTCTGCATCCCCTTCTCTCTGGACTTGCCCCTGGAAAAACATCTGTCTGTTCTCCAGTCATATCAAAGCTCAAATATTGTTGCAGGTCTAGTACAGATGATTCAGACTATTCCTATTGCCTTGGTGGAGCTTCCGTTGTGTCTTCTGAATCGTCTCCTGCTATCTGACCCACAACACACCACTCCGTGCCTTATCACTGCCGCCCAGGCCTCCGCTTTCCTCCCGCACGGCACAGAAAGCTCAGACAATGGAGCAG

Function

symbol description
stk36 Predicted to enable ATP binding activity and protein kinase activity. Acts upstream of or within several processes, including axoneme assembly; determination of left/right symmetry; and smoothened signaling pathway. Predicted to be active in cytoplasm. Is expressed in neural tube. Orthologous to human STK36 (serine/threonine kinase 36).

GO:

id name namespace
GO:0007224 smoothened signaling pathway biological_process
GO:0007228 positive regulation of hh target transcription factor activity biological_process
GO:0035082 axoneme assembly biological_process
GO:0006468 protein phosphorylation biological_process
GO:0009953 dorsal/ventral pattern formation biological_process
GO:0007368 determination of left/right symmetry biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030912-6 Predicted to enable ATP binding activity and protein kinase activity. Acts upstream of or within several processes, including axoneme assembly; determination of left/right symmetry; and smoothened signaling pathway. Predicted to be active in cytoplasm. Is expressed in neural tube. Orthologous to human STK36 (serine/threonine kinase 36).

Ensembl:

ensembl_id ENSDARG00000061095

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00058981 False 4474 mRNA 0.48 20 30392148 30411165
TCONS_00058982 True 685 processed_transcript 0.49 5 30392419 30409240

Neighbor

gene id symbol gene type direction distance location
XLOC_030166 zgc:158412 coding upstream 328 30384554 ~ 30391820 (+)
XLOC_030165 adamts15a coding upstream 183080 30179010 ~ 30209068 (+)
XLOC_030164 BX897688.1 coding upstream 225576 30166456 ~ 30166572 (+)
XLOC_030163 timm8b coding upstream 301642 30089715 ~ 30090506 (+)
XLOC_030162 dre-mir-125b-2 coding upstream 393301 29998762 ~ 29998847 (+)
XLOC_030168 hmbsa coding downstream 106871 30518036 ~ 30534426 (+)
XLOC_030169 dpagt1 coding downstream 177691 30588856 ~ 30595372 (+)
XLOC_030170 hinfp coding downstream 185312 30596477 ~ 30612729 (+)
XLOC_030171 abcg4a coding downstream 213018 30624183 ~ 30672482 (+)
XLOC_030172 pdzd3b coding downstream 269639 30680804 ~ 30697908 (+)
XLOC_030161 dre-let-7a-4 non-coding upstream 401604 29990452 ~ 29990544 (+)
XLOC_030160 mir100-2 non-coding upstream 401927 29990147 ~ 29990221 (+)
XLOC_030159 NA non-coding upstream 403717 29902153 ~ 29988431 (+)
XLOC_030174 BX276103.2 non-coding downstream 311964 30723129 ~ 30727648 (+)
XLOC_030177 NA non-coding downstream 369265 30780430 ~ 30974079 (+)
XLOC_030178 NA non-coding downstream 541058 30952223 ~ 30954521 (+)
XLOC_030185 CR759893.1 non-coding downstream 1137147 31548312 ~ 31548787 (+)
XLOC_030191 NA non-coding downstream 1493682 31904847 ~ 31912078 (+)

Expression


Co-expression Network