LOC118938315


Basic Information

Item Value
gene id LOC118938315
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 50867328 ~ 50868744 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005035584.1
CCAGTAACCCAGTACGATTTCCTGCAAATTCCAAAGGCAGATCCCTGCTGGAACATTTCAACCCGCCTGCCACGTCAGTTTGCTTCCACCATCCTCCCTCgctccttctcctcttctgctccttctctttctctcgctctttccgcCACAGAGGACTGGTCAAAACTGAACGGTACTAGTTGTTTTGAGGCGTAGTCAGAGTGACAGGTTAAAGGTTTGTCTTCAGCTCTGGTCAGCGGTATCTTTTGAAGCTCTGTGTTTCGCTGAGAGAGGGGACATCTTCGCCAAGGCCTGGGCTGCTCTGACCGAACTAATGGGCAGTGACCTGCAGCCGGAGCGACCCCGCGGACcttcccccctcctcacccccccgCCTGCCCAGTGTTCAGACTACCTGTTCATCAGGCTGAAGCTGAACAGTAGTCTGCACATTGGTTAGGCTGGgccgggacacacacacaggacacatcTAACTACCAGCCAGCAGGGGCTCTGGTGAGAGGCTCTGGCCGGGTCTGATTCTCCACCATGAcaatgagagggaggagggagcatGCAATGCAGATCATATATCAGCCCATGGAGTAGTAGCAGAATCTTTCTGACAGTTTGTATTGTACTATTTTGTGTTGTACTTATCCCAGCGTTAGACACTCACCTCCTCATCCTTGTACCAGGATAGTGACTCTGCGGTCAGGACGAACCAGTACTCCTTGGAGCCTCCCTTCATGATGCTGATGTTGATGGTGAGCCAGCCTTTGCGGATGACCTGTTAGGGGAGAGATAGGGGTGGGGGAACAGGGGAGCGAGGGGTGGTGGGGGACAAGGTATACCAGGAGGATGGAGGGAAAACAAGTCATTAAAGTACTCATGATTTACCTCCTGGAGATCTTGTGATATGACTAACTTAACTGACCAATAAAAACCTTACCTGGGTA

Function

NR:

description
dynamin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005035584.1 True 938 mRNA 0.52 2 50867328 50868744

Neighbor

gene id symbol gene type direction distance location
LOC110486728 qtrt1 coding downstream 34620 50827395 ~ 50832708 (-)
LOC110485208 LOC106606837 coding downstream 42895 50732097 ~ 50824433 (-)
LOC118938085 NA coding downstream 137233 50719812 ~ 50730095 (-)
LOC110486719 LOC105013088 coding downstream 170238 50690182 ~ 50697090 (-)
LOC110486716 LOC106601616 coding downstream 214044 50647434 ~ 50653284 (-)
LOC110486730 tmed1 coding upstream 7771 50876515 ~ 50883694 (-)
LOC110485210 adgrl1 coding upstream 141875 51010619 ~ 51230197 (-)
LOC110486734 LOC106606824 coding upstream 456162 51324906 ~ 51329316 (-)
LOC110486738 LOC106606773 coding upstream 536513 51405257 ~ 51412417 (-)
LOC110486740 LOC106606777 coding upstream 553846 51422590 ~ 51424573 (-)
G1185048 NA non-coding downstream 80528 50785477 ~ 50786800 (-)
G1185012 NA non-coding downstream 158201 50708892 ~ 50709127 (-)
G1184978 NA non-coding downstream 158610 50707867 ~ 50708718 (-)
G1184979 NA non-coding downstream 163346 50703479 ~ 50703982 (-)
G1185123 NA non-coding upstream 67614 50936358 ~ 50936584 (-)
G1185154 NA non-coding upstream 121629 50990373 ~ 50991627 (-)
G1185128 NA non-coding upstream 134747 51003491 ~ 51007735 (-)
G1185194 NA non-coding upstream 195379 51064123 ~ 51082403 (-)
G1185256 NA non-coding upstream 304304 51173048 ~ 51173497 (-)
G1185046 NA other downstream 85470 50780265 ~ 50781858 (-)
G1184986 NA other downstream 238789 50626647 ~ 50628539 (-)
LOC110486698 LOC106601594 other downstream 1030996 49831067 ~ 49853671 (-)
G1183706 NA other downstream 1178872 49685338 ~ 49688456 (-)
G1186080 NA other upstream 453056 51321800 ~ 51323931 (-)
G1186075 NA other upstream 483565 51352309 ~ 51373954 (-)
G1186154 NA other upstream 621033 51489777 ~ 51490241 (-)
G1186381 NA other upstream 1056219 51924963 ~ 52030660 (-)
G1186216 NA other upstream 1141946 52010690 ~ 52011211 (-)

Expression


Co-expression Network