LOC110515614 (LOC105008474)


Basic Information

Item Value
gene id LOC110515614
gene name LOC105008474
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 59651360 ~ 59912068 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036941757.1
ATTTTTTGTTTCAAGATGTTCGCAAACTAACTTTCACTCTGTTGAAACATCTGTACTTGAGAAACTGTGGAATAGTATTTAAACAGTTGAATCCCATGTAGTCCGCTTCTTACTCACGGCAATTACGATTAAACGTTTCAAAACAGAAACATTTGTATTTTACCGTGGTCAATCATCATTGATGTAGCTAAACAGGGGTCTGAGTCGATCGTCGATTGAATCGCTCACACAGTACAGCGAGTTGTGACAGTGCTGAACTCGAGAACTGTCATCTGAAAAGGAGTGTGCTGCTGAGTGCTCGCTCTTTTCGAATAGTATCAACAAGACAGAGATACCCGGAAGGCACGAAAGTTAATTCAGGGGACTAGAATGAATCGTTTCAAGACCTCCAAATTCAAAAACACCACCCCGAAGATCGCCAAGAAAGATGGCTGGATCAGTAATGTCCGGGCAGGATCCTTCACCTCTCAGGGGAACCACATCAAATCCAGCACCAGGCTTGTGGCCTTCAACACTGACCAGGCCGGTGGAGGAATGCTCGGCCTCACCTCTGTGGAACCAGGTTCTGATGGCAAGTGGACAGTGACTGTGATCCCATGTCATGCTGatttgATAACTGATTTGGACTTCTCTCCGTTTGATGATAATCTCCTGGCTACCTGTTCTGCAGATGAAACGGTGAAGCTGTGGCGTGTGTGTGAACCAGAACAGAAGCAGCCCGGGGGGGCGGAGGTGACCCTGTGTCCCGGAGAGGGTCGTCTGGAGCTGGTCGCCTTCCACCCCACCTCCTCTGGCCTGCTGGCTGTGGGCTCCACCAAGACAGCCCAGCTCTGGGACACCAGCCGCCAACAATCACCGCTAGCAGCTCTGGAGCCGCACGGTGATCAGCTGCAGAGTCTTAGCTGGAAACAGGACGGCTCCCTGCTGGCTTCCTCCTGCAAGGACAAAAAGCTGCGAGTCTTTGACCCACGAGCCCAGCTGAAACCTGTTCAGAGTGCCCAGGGACTTCAGAGTAACAAGGACTCTCGAATCCTTTGGGTCAAGGACTCTGACCACATACTGACCACTGGCTTCGATCAGATGCGGGGTCGGGAGGTGAGACTGTGGGACAGCAGGAAATTGGGTTCCTCTCTGGGCTCTGCCAACCTGGGCACCTCCAATGGGACCCTGATGCCTTTGTTTGACCCTGACTCAGGCCTCCTCACAGTATCTGGGATGGGAGATAGTGTCATTGACTGCTTTGAGGTGTCTGCCACTGAGCCATTCCTTTCCCAAGtgagccactgTCTGACGGAAGCCCCAACGCGAGGCGTTGCCATGGTACCCAAGTTGGCATTGGATGTCCTGTCCTGTGAGGTCATGCGGGTCCTGCAGCTGACGGACAGCTTCATCGTGCCAATCAACTACCACGTGCCCCGCAAGTCAGGACAGGAGTTCCATGCAGACCTGTACCCAGACACCTTGGGCCGGACAGCAGCCATGTCAGCTGCAGAGTGGTGGAAAGGTGGCGAGAAACAGGTTGAGAAGGTCAGTGTCAACCCATCCAATCATCAGAAGCCTAACAACGCTAAGCCAGCCAATCAGACGCCTGCTAAGAAAGAGCTGCCCAGTGGGAGGAGCAAAGAGGAGGCTCCAGTGCGAGGCTGCTCCACCTCCAGCAGTCCCCTGAGCTCCCCCAGCAGCAGTGCTGCCCCGTCCcgctccccctcctccacctctggcCTCTCCTCAGGCTtcctccccagccccagccagaGTGCCAAAGCCATCAGCAGCATGTTGGgtccCAGCAGTAAGTTTCGTCACCTGCAGGGTGCGGTGCTTCACAGAGACACCCACTTCACCAACCTGAAGGGGCTCAACCTCACCACGCCCGGGGAGTGTGATGGCTTCTGTGCCAACCGCCATCGCGTGGCCGTGCCCCTCGCCACCGCCGGGGGTCAGATCGCCATCTTTGAGTTGTCTCAGGCTGGGAAGCTAGCGGACACGGGCCTGCCCACCATCCAGAACTCTGTCAACGTGGCTGACTTCTCCTGGGACCCCTTCAACAGTCACAGGCTGGTGGTGGCAGGCGACGATGCTAAGATCCGTGTGTGGCAGGTGCCTGAGGGGGGTCTGACAGAGACCCTGACTGAGCCAGAGACCATCCTGCAGGGCCACACTGAGAAGATCTACTCAGTCAAGTTCCACCCCCTGGCGTCGGGCCTGCTGGCATCCTCCTCCTACGACCAGACGGTGCGCCTGTGGAACCTGGAGTCTGGGGACGAGGTCAAAGCGCTCCGGGGACACCAGGATCAGATATTTGGGATGGCGTGGAGTCCGGATGGTAAACTCCTGGCCACGGTGTGTAAGGATGGGAAACTGCGCATCTACGACCCTCGCAAGTCTGCTGACCcagtacaggaggGTGCAGGTCCTGAGGGCCACAGAGGGGCtcgtgtggtgtgggtgtgtgacgGAAAATACCTGATGGTGTCAGGATTCGACAGTCGCAGTGAGAGAACCCTGTACCTGCACTCCGTTGAGTCCCTGTCCTCCGGGGCCATCGCCAGCGCCCCCACCGACGTCTCACCCTCCACCCTCATTCCCTTCTACGACCCCGACACCAGCGTCGTCATCCTCACCGGAAAGGGTGACACGCGAGTGTACATCTTTGAGATAGTGCCAGAAGCTCCCTATTTCCTGGAATGTGCCAGCTTCAACTCCTCAGAGCCCCACAAGGGCTTGGCCTTCCTGCCGAAGACTGAGTGTGTGGTGCAAGAGGTCGAGGTGGCCAGGGGTCTGAGGCTCAGTAAGACTTCCATAGAGCCAGTGGCCTTCAGAGTCCCCCGCGTCAGAAAAGAGTTCTTTCAGGATGATGTGTACCCAGACACAGCAGTGTGGTGGGAGTCTTCTCTGACAGCCTCAGCCTGGCTGGCTGGTTCTGATGGGAAGCACCAGTCCATCAGCCTCAAGCCCAAAGACATGACCCCAGtGAGTGAGGCGCCCAAGGAGGTCCAAGTGAGAAAGTACCTTCCATCCTCTCACTACCTGGAGGAGAAGACTGACGAGCAGAAGaaagatgagCTGTTGAGTGCCATGATAGGCAAGCTGGGGAACATGGACGACAACCCTCTACCACAGGAGTCCTTCCAGGGAGTAGAAGACGATGAGTggGGTGACTAGTGTGTGTTGCCTTGCGGACCAATCAGGGTCCAGCAGTAGCCAAGGGCCTGTTGGACTGAAACGTGTCATTCCTGTGTGCCACTGATGTGTCCTATGTCAAAAGAACATCTCTCAAACACATAACATTAACCTGTCATTAGGGTTGTAAAATTCTGTCAACAAAATGTCTAGGTTTTCCAGAAATACCAATTGGAGAATTCTTGGATTTCCTGCTTGTTTTCCTGGGAATTTTAGGGAAAGTTACCAGACTTTTGCAGCCCTACCTCCCATATCCTCGTATCATCCTCTAATACTCTGAGTAAGTAGATGTTGCCTCTAACCATTGACTGAATCAGGATCAGATATGTTTTCCTCCTCATAATGTTTAAAGGTAGGACTGGGGTTTGGGAATCTGATCCTAGGTCTGTTGTTAAAGGCAACCTCACCCCCAATTTGACCTTTGACTTGCAGCTGCCTTGTACTGTAAATAGCTAACATTCCTACCAGGCTAGATAGTTAAATGACTCCCAACACTCCCTTACAACCCAGCCCTTACCGCCACACTGGATGGACACCTGTGTGTCTGTCACCACTCCTAACCTTACACCTGTGTGTCTGTCACCACTCCTAACCTTACACCTGTGTGTCTGTCACCACTCCTAACCTTACACCTGTGTGTCTGTCACCACTCCTAACCTTACACCTGTGTGTCTGTCACCACTCCTAACCTTACACCTGTGTGTCTGTCACCACTCCTAACCTTACACCTGTGTGTCTGTCACCACTCCTAACCTTACACCTGTGTGTCTGTCACCACTCCTAACCTTACACCTGTGTGTCTGTCACCACTCCTAACCTTACACCTGTGTCATAATAATAATGACTAGACCACTGCTTGCTTTTTTATGGGCCAATATGAACCATAGTCCATAATCTTCTAAACACAGTAACTATGAAAAAGTCAAACGCATGCACCTGAATACAGTATCTATGGTCTTCCAGATGTACCACCTCCTATGCATCACtatacattaacacacacacacacacacacacacacacacacacacacacactcacactccaccTGGATATCCCATCTGCACCTCCAGCTCCTGTAGTCCGTGGATGTTGGATGGTCTGTGGTATCCCCATACGGCCTCAACAAGCACACAgcaaaaacacacagacagggtACAACAGGGTAAAAACAGCCTTCAGGTTAAAGCATGGCTGGCTTCTATTGATAGGAATATAATATTGTTTTGTTGTTTAGGTAGCTTCATTCTCTGGCCAGTGATAAAGACCTACTAACAGTCCTGTACCActccagggtcgtgttcattaatCACCAAACGGACGAAAACAACCTCAAACAGGGAGGGATTACCTGGATTTTCGTTTTCCGTTGCAAAGCATTTCAAAACGTTTTCCGTTGCGTGCTGTAATGAACGTGACCCAGATGCATATCTTAGTTCAGCCACCAGATCTCGGGAGATAGTTTATAGCATCGGGGCTGCGCTCTGTTTTGGGGGACTCTAAAATGTGTGTGACGTTCTTACATGTGGGTGTCATGTATTGAAAAGCCAAAACACCCCCTGTGGGAGTTGTACAGGAGTGTGTCTGTGGATCTCTGAGGTTGTAATGTGGTGGGAAGTAGTATGTATCTGTACCTTTCTTTCTAGATTGATAGACTGTATAACTGGAATTCCTGTACCTCATATGTTAACACTTCGTCTTAAGACTGTTATTGAAGTATTCCTCACTAAAGGAGCTCATTCttttattatactgtagtaaacaATCATTTTGTTACTTTTTCTTAATAACTTACAGTATTATTACTATATGATGCAATCACAGCAGCCATGATCAAGACTAGTACAACACAAGGCAATACTTTTAATAGGCTAATCCAAGTCTGATCGAACCAATCATGTTGTTTACAATGACAGAAAGACTGGAACCAACCAAGCATTCTTGAATAGTAGTCAGACTCActgagtttacacaggcagtAAAATTCTGTCATGTGTTTTTTAATTGGTCTTTAAACCAATCAGATAAGAGCTTTTTGCCAGTACttgggcaaaatatcagaattgggctgcctgtgtaaacgcagccattgtGGAGTACTTGACAAGTGAACAGACACCACTGCATTGACTGTAGGGCCTAGATATTGTTGGTGTCAGTGATTGTGTGTTTGTCATGTGTTTTGTGCCTGCAATCTCTCAGATGTCTTACATTGTTCTTTGGGAAATTAACAAAAAGAAAAATCTCTTTTATACTTTGAATAAAGCATTATTTCTCTGTCCGTCTTATGAATAATGGTTTTGTGGGAATGTTCATGTTGCCTTGCAATAAACAACTGTTTGAACCTTG

Function

NR:

description
coronin-7-like

GO: NA

KEGG:

id description
K18619 CORO7; coronin-7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036941757.1 True 5532 mRNA 0.50 27 59651360 59912068

Neighbor

gene id symbol gene type direction distance location
LOC110487009 LOC106601835 coding downstream 2446 59644584 ~ 59648914 (-)
LOC118938337 LOC105021644 coding downstream 108241 59523790 ~ 59543119 (-)
LOC110487012 LOC106606491 coding downstream 134420 59481481 ~ 59516940 (-)
LOC110516720 adcy9 coding downstream 179295 59382826 ~ 59472065 (-)
LOC110485268 LOC106601889 coding downstream 270460 59289251 ~ 59380900 (-)
LOC110512532 LOC106606500 coding upstream 9409 59921477 ~ 59932329 (-)
LOC110516349 cfap70 coding upstream 26043 59938111 ~ 59958206 (-)
LOC118938340 NA coding upstream 280844 60192912 ~ 60196843 (-)
LOC110486988 LOC106606456 coding upstream 348652 60260720 ~ 60262829 (-)
LOC110486987 cyp2k4 coding upstream 362657 60274725 ~ 60367022 (-)
G1192355 NA non-coding downstream 18436 59632023 ~ 59632924 (-)
G1192356 NA non-coding downstream 19905 59630994 ~ 59631455 (-)
G1192357 NA non-coding downstream 24682 59625821 ~ 59626678 (-)
G1192349 NA non-coding downstream 49073 59600162 ~ 59602287 (-)
G1192453 NA non-coding upstream 573 59912641 ~ 59912944 (-)
G1192458 NA non-coding upstream 3982 59916050 ~ 59917212 (-)
G1192459 NA non-coding upstream 7483 59919551 ~ 59921225 (-)
G1192462 NA non-coding upstream 24657 59936725 ~ 59937094 (-)
G1192468 NA non-coding upstream 49978 59962046 ~ 59962441 (-)
G1192205 NA other downstream 375511 59275141 ~ 59275849 (-)
G1192158 NA other downstream 530204 59119541 ~ 59121156 (-)
G1192082 NA other downstream 742128 58906153 ~ 58909232 (-)
G1192519 NA other upstream 293714 60205782 ~ 60208270 (-)
G1192535 NA other upstream 307098 60219166 ~ 60314554 (-)
LOC110486976 LOC106606471 other upstream 645714 60460043 ~ 60565934 (-)

Expression


Co-expression Network