LOC110486987 (cyp2k4)


Basic Information

Item Value
gene id LOC110486987
gene name cyp2k4
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 60274725 ~ 60367022 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036941778.1
AttaaggagcatcagtgtgttgTCTTTTTAGCCCAGTATAAGGTGTATGAGCTCAGTCTGAAGATGTCTCTTATAGAAGATATTCTACAGACATCAAGCACAGTGACACTGCTGGGTACTGTGCTGTTTCTGCTGGTCCTCTACCTTCGCTCctctggttccagctctgaggaACAGGGGAAGGAGCCTCCAGGACCGAGGCCGCTGCCCCTGCTTGGTAACATGCTCCAGCTGGACCTCAAGAAGCCCTACTGCACTCTCTGCGAGCTCTCCAAGAAATATGGTTCCATCTTCACGGTTCACTTCGGACCCAAGAAAGTGGTTGTTCTGGCAGGATACAAGACGGTCAAGCAGGCGCTGGTCAACCAGGCAGAGGACTTTGGGGACAGGGACATCATGCCTGTGTTCTATGATTTCAACCAAGGACATGGGATTCTGTTTGCCAATGGAGACTCATGGAAAGAGATGAGGCGCTTTGCCCTGACAAACCTTAGAGACTTTGGGATGGGCAAGAAAGGGAGTGAGGAGAAAATCTTAGAGGAAATCCCCTACCTGATTGAAGTGTTTGAAAAACATGAGGGTAAGGCATTTGACACAGCACAGCCTGTGCTTTATGCCGTCTCCAACATAATCTCGGCCATTGTCTATGGCAGCAGGTTTGAATACACTGACCCACTATTCACAGGCATGGTGGACAGGGTCAATGAGAGTGTTCACCTTACAGGTTCTGCATCAATTCAGATGTACAACATGTTTCCCTGGTTGGGTCCGTGGATAAACAACCTGACACGTCTGAAAAAGAATATTGCTGATATGAAGATGGAGGTGATAGAGCTGGTGAGGGGCCTGAAGGAGACTCTGAACCCTCACATGTGTAGAGGCTTTGTGGACTCGTTCCTCGTCCGAAAGCAAACCCTGGAGGAATCTGGCAATATGGATTCTTTCTACCATGACGACAACCTGGTATTTAGTGTTGGTAATCTGTTTGGTGCTGGTACCGACACCACCGGGACAACCCTGCACTGGGGTCTGCTGCTAATGGCCAAGTACCCCCATATACAGGATCAGGTCCAGGAGGAGATCAGCAGGGTTATAGGAAGTCGTCAAACCTTGGTAGAGGACAGGAAGAACCTGCCCTACACGGATGCAGTGATCCATGAGACCCAGAGACTGGCCAATATTGCACCCATGTCCATCCCTCACACCACCAGCCGAGATGTGACCTTCCAGGGATATTTCATCAAAAAGGGGACGTCTGTGATACCTCTACTGACGTCGGTCCTACAGGACGATAGCGAATGGGAGAGCCCTCACACCTTAACCCCCTCCCACTTTCTGGATGAGAAGGGAGGATTTGTCAAGAGGGACGCCTTCATGGCCTTCTCTGCAGGTCGTAGGGTGTGTCTGGGGGAGGGTCTGGCCAGGATGGAGCTCTTCCTCTTCTTCACCTCCCTCCTGCAGCACTTtcgtttctctcctcctcctggagtAACAGAGGATGATCTGGACCTGACACCATCCGTGGAGTTCACCCACAATCCGTCACCTCACCAGCTATGTGCTGTGAGCCGTGTCTGAGATTAGAACATGAAAatattggtggggcaaactcaatCAAAAAAGTGAATAATCCCAGAAATTAGTTTCCGCGAAATACACAAACATTATTATATTTAGTTTATGATCGGTTCATAGGCACCTTCCAATATCTTTTACATTTAATTACACTGAAGACTACGGTAGTGGAATTATTTTTATAGAGTGAAGTCTATTTTACTTCAttttcagcaatggtctgcagtATTGCTAAATTGCTAAGTATTGCTAAGAGTATTGGGACGCAGTCCAACACGTTCTGAGGGTAGTTGCATCCGTCTGTCTGTTAATAAAATAATCCTGTTAAGAATAAAGCAACAAA
>XM_036941779.1
GTGTACTTTATGTAAACTTTATCTGTCCAGCTCTCCAAGAAATATGGTTCCATCTTCACGGTTCATTTTGGACCCAAGAAAGTGGTTGTTCTGGCAGGTTACAAGATGGTCAAGCAGGCGCTGGTCAACCAGGCAGAGGACTTTGGGGACAGGGACATCACACCTGTGTTCTATGAGTTCAACCAAGGACATGGGATTCTGTTTGCCAATGGAGACTCATGGAAAGAGATGAGGCGCTTTGCCCTGACAAACCTTAGAGACTTTGGGATGGGCAAGAAAGGGAGTGAGGAGAAAATCTTAGAGGAAATCCCCTACCTGATTGAAGTGTTTGAAAAACATGAGGGTAAGGCATTTGACACAGCACAGCCTGTGCTTTATGCCGTCTCCAACATAATCTCGGCCATTGTCTATGGCAGCAGGTTTGAATACACTGACCCACTATTCACAGGCATGGTGGACAGGGTCAATGAGAGTGTTCACCTTACAGGTTCTGCATCAATTCAGATGTACAACATGTTTCCCTGGTTGGGTCCGTGGATAAACAACCTGACACGTCTGAAAAAGAATATTGCTGATATGAAGATGGAGGTGATAGAGCTGGTGAGGGGCCTGAAGGAGACTCTGAACCCTCACATGTGTAGAGGCTTTGTGGACTCGTTCCTCGTCCGAAAGCAAACCCTGGAGGAATCTGGCAATATGGATTCTTTCTACCATGACGACAACCTGGTATTTAGTGTTGGTAATCTGTTTGGTGCTGGTACCGACACCACCGGGACAACCCTGCACTGGGGTCTGCTGCTAATGGCCAAGTACCCCCATATACAGGATCAGGTCCAGGAGGAGATCAGCAGGGTTATAGGAAGTCGTCAAACCTTGGTAGAGGACAGGAAGAACCTGCCCTACACGGATGCAGTGATCCATGAGACCCAGAGACTGGCCAATATTGCACCCATGTCCATCCCTCACACCACCAGCCGAGATGTGACCTTCCAGGGATATTTCATCAAAAAGGGGACGTCTGTGATACCTCTACTGACGTCGGTCCTACAGGACGATAGCGAATGGGAGAGCCCTCACACCTTAACCCCCTCCCACTTTCTGGATGAGAAGGGAGGATTTGTCAAGAGGGACGCCTTCATGGCCTTCTCTGCAGGTCGTAGGGTGTGTCTGGGGGAGGGTCTGGCCAGGATGGAGCTCTTCCTCTTCTTCACCTCCCTCCTGCAGCACTTtcgtttctctcctcctcctggagtAACAGAGGATGATCTGGACCTGACACCATCCGTGGAGTTCACCCACAATCCGTCACCTCACCAGCTATGTGCTGTGAGCCGTGTCTGAGATTAGAACATGAAAatattggtggggcaaactcaatCAAAAAAGTGAATAATCCCAGAAATTAGTTTCCGCGAAATACACAAACATTATTATATTTAGTTTATGATCGGTTCATAGGCACCTTCCAATATCTTTTACATTTAATTACACTGAAGACTACGGTAGTGGAATTATTTTTATAGAGTGAAGTCTATTTTACTTCAttttcagcaatggtctgcagtATTGCTAAATTGCTAAGTATTGCTAAGAGTATTGGGACGCAGTCCAACACGTTCTGAGGGTAGTTGCATCCGTCTGTCTGTTAATAAAATAATCCTGTTAAGAATAAAGCAACAAA
>TU1360480
aaacaaggacatttctaagtgaccccaaacgtttgagcggtagtgtatatatttatttattgagGAGACCTTTTCTAGAGCAAACTCATGGTCAGGATAACAGGAGACAGTGGTTTTATCAGAGTAGAACATGTTATGTAAAAACCCTTCAGcagaaacatttaaaaaatatatattcttaattAAACCATGATTAATATTTTGCCGTGTAGTATCTCTAATACATCCTATGGGACAATTATCACTGAGATCATATGCAAATACTCCACTACACAAATATTTATGGGGGTTATTAGTAAGAATTAACTCAATCAATGAAGAGTTAACAGGGCCACATGGGTTTTGAGATCAATTGAGTAAGATACAAATCTATGCATATAAACGTAAATTGATCTGCAGCCAGGGATAGCTAATCCAGATTCAAATCCCCTAAAATGACCAACTCCGAGGACAGAACAGGTATTAAACATTCAAAGTATAGCACCAATAGCATCCGCGATGGCAGCAGGGGGGCAGTACATACCAGCAACAAATACATTTGTATTTTGGTTTATCGACAACCAGGTCGTCAAATTTCTTGAgaacaaaaatatttatttaataagTCACTTTCTGAGCACTTTTACAATTGGCAAATATGTGTGGAAGGTTTCGTTCAAATCAAAAAGGGGTGTTGTCAAAAAAGCAGACAGGCGGATGCAACTACCCTCAGAACGTGTTGGACTGCGTCCCAATACTCTTAGCAATACTTAGCAATACTGCAGACCGATGCTGAAAATGAAGTAAAATAGACTTCACTCTATAAAAATATGTTCCACTACCGTAGTCTTCAGTGTAATTAAATGTAAAAGATATTGGAAGGTGCCTATGAACCGATCATAAACTAAATATAATAATGTTTGTGTGTCGCGCAAACTCATTTCTGGGATTATTTATTATAATGGTACATTTAATGTGTAGTGGTTTCGATGCATTTTAGCTTTTTTGATTGAGTTTTTGCCCCACCAATATTTTCATGTTCAAATCTCAGACCCGGCTCACAGCACACAGCTGGTGAGGTGAAGGGTGGAGGGTGAACCCCACGGATGGTGTGAGGTCCAGATCATCCTCTGTTactccaggaggaggagagaaacgaAAGCGCTGCAGGAGGGAGGTGAAGAAGAGGAAGAGCTCCATCCTGGCCAGACCCTCCCCAAGACACACCCTACGACCTGCAGGGAGGATTTGTCAAGAGGGACGCCTTCATGGCCTTCTCTGCAGGTCGTAGGGTGTGTCTGGGGGAGGGTCTGGCCAGGATGGAGCTCTTCCTCTTCTTCACCTCCCTCCTGCAGCACTTtcgtttctctcctcctcctggagtAACAGAGGATGATCTGGACC
>TU1360472
TTGGGTCCGTGGATAAACAACCTGACACGTCTGAAAAATAATATTGCTGATATGAAGATGgaggtgacagagctggtgaggGGCCTGAAGGAGACTCTGAACCCTCACATGTGTAGAGGCTTTGTGGACTCGTTCCTCGTCCGAAAGCAGACCCTGGAGGAATCTGGCAATATGGATTCTTTCTACCATGACGACAACCTGGTATTTAGTGTTGGTAACCTGTTTTCTGCTGGTACCAACACCACCGGGACAACCCTGCGCTGGGGTCTGCTGCTAATGACCAAGTACCCCCATATACAGGATCAGGTCCAGGAGGAGATCAGCAGGGTTATAGGAAGTCGTCAAACCTTGGTAGAGGACAGGAAGAACCTGCCCTACACGGATGCAGTGATCCATGAGACCCAGAGACTGGCCAATATTGCAC
>TU1360474
taataTAAAATTGTTTTATGCGTATTCCACCTGAATCTCTGTGTAGATGTACAACATGTTTCCCTGGTTGGGTCCGTGGATAAACAACCTGACACGTCTGAAAAAGAATATTGCTGATATGAAGATGGAGGTGATAGAGCTGGTGAGGGGCCTGAAGGAGACTCTGAACCCTCACATGTGTAGAGGCTTTGTGGACTCGTTCCTCGTCCGAAAGCAAACCCTGGAGGAATCTGGCAATATGGATTCTTTCTACCATGACGACAACCTGGTATTTAGTGTTGGTAATCTGTTTGGTGC
>TU1360468
ACACACACTTGTTCCAttaaggagcatcagtgtgttgTCTTTTTAGCCCAGTATAAGGTGTATGAGCTCAGTCTGAAGATGTCTCTTATAGAAGATATTCTACAGACATCAAGCACAGTGACACTGCTGGGTACTGTGCTGTTTCTGCTGGTCCTCTACCTTCGCTCctctggttccagctctgaggaACAGGGGAAGGAGCCTCCAGGACCGAGGCCGCTGCCCCTGCTTGGTAACATGCTCCAGCTGGACCTCAAGAAGCCCTACTGCACTCTCTGCGAGCTCTCCAAGAAATATGGTTCCATCTTCACGGTTCACTTCGGACCCAAGAAAGTGGTTGTTCTGGCAGGATACAAGACGGTCAAGCAGGCGCTGGTCAACCAGGCAGAGGACTTTGGGGACAGGGACATCATGCCTGTGTTCTATGATTTCAACCAAGGACATGGGATTCTGTTTGCCAATGGAGACTCATGGAAAGAGATGAGGCGCTTTGCCCTGACAAACCTTAGAGACTTTGGGATGGGCAAGAAAGGGAGTGAGGAGAAAATCTTAGAGGAAATCCCCTACCTGATTGAAGTGTTTGAAAAACATGAGGGTAAGGCATTTGACACAGCACAGCCTGTGCTTTATGCCGTCTCCAACATAATCTCGGCCATTGTCTATGGCAGCAGGTTTGAATACACTGACCCACTATTCACAGGCATGGTGGACAGG
>TU1360469
gtaactgagTCTATGGTGTACTTTATGTAAACTTTATCTGTCCAGCTCTCCAAGAAATATGGTTCCATCTTCACGGTTCATTTTGGACCCAAGAAAGTGGTTGTTCTGGCAGGATACAAGACGGTCAAGCAGGCGCTGGTCAACCAGGCAGAGGACTTTGGGGACAGGGACATCATGCCTGTGTTCTATGATTTCAACCAAGGACATGGGATTCTGTTTGCCAATGGAGACTCATGGAAAGAGATGAGGCGCTTTGCCCTGACAAACCTTAGAGACTTTGGGATGGGCAAGAAAGGGAGTGAGGAGAAAATCTTAGAGGAAATCCCCTACCTGATTGAAGTGTTTGAAAAACATGAGGGTAAGGCATTTGACACAGCACAGCCTGTGCTTTATGCCGTCTCCAACATAATCTCGGCCATTGTCTATGGCAGCAGGTTTGAATACACTGACCCACTATTCACAGGCATGGTGGACAGG

Function

NR:

description
cytochrome P450 2K3-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0005506 iron ion binding molecular_function
GO:0070330 aromatase activity molecular_function
GO:0020037 heme binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036941778.1 False 1918 mRNA 0.48 9 60274725 60297665
XM_036941779.1 False 1681 mRNA 0.47 8 60274725 60338427
TU1360480 False 1383 lncRNA 0.41 3 60275133 60367022
TU1360472 False 424 TUCP 0.50 3 60278278 60331404
TU1360474 False 297 TUCP 0.44 2 60279837 60283896
TU1360468 False 714 TUCP 0.50 4 60292459 60297680
TU1360469 True 477 TUCP 0.47 4 60292459 60338442

Neighbor

gene id symbol gene type direction distance location
LOC110486988 LOC106606456 coding downstream 11896 60260720 ~ 60262829 (-)
LOC118938340 NA coding downstream 78005 60192912 ~ 60196843 (-)
LOC110516349 cfap70 coding downstream 316519 59938111 ~ 59958206 (-)
LOC110512532 LOC106606500 coding downstream 342396 59921477 ~ 59932329 (-)
LOC110515614 LOC105008474 coding downstream 362657 59651360 ~ 59912068 (-)
LOC118936527 LOC106606405 coding upstream 39426 60377853 ~ 60386961 (-)
LOC110486979 LOC106606406 coding upstream 65190 60403617 ~ 60408720 (-)
LOC110486976 LOC106606471 coding upstream 126099 60460043 ~ 60565934 (-)
LOC110538808 LOC106601873 coding upstream 668399 61005929 ~ 61026251 (-)
LOC110486965 LOC100135781 coding upstream 1207838 61546265 ~ 61550711 (-)
G1192606 NA non-coding downstream 30328 60182643 ~ 60244397 (-)
G1192629 NA non-coding downstream 40755 60233141 ~ 60233970 (-)
G1192628 NA non-coding downstream 42197 60231858 ~ 60232528 (-)
G1192625 NA non-coding downstream 47126 60222682 ~ 60227599 (-)
G1192532 NA non-coding downstream 142615 60129737 ~ 60132110 (-)
G1192531 NA non-coding upstream 29201 60367628 ~ 60370340 (-)
G1192673 NA non-coding upstream 42914 60381341 ~ 60381568 (-)
G1192674 NA non-coding upstream 48031 60386458 ~ 60386673 (-)
G1192705 NA non-coding upstream 119173 60457600 ~ 60458463 (-)
G1192519 NA other downstream 66455 60205782 ~ 60208270 (-)
LOC110516720 adcy9 other downstream 804434 59382826 ~ 59472065 (-)
LOC110485268 LOC106601889 other downstream 960442 59289251 ~ 59380900 (-)
G1192205 NA other downstream 998876 59275141 ~ 59275849 (-)
G1192757 NA other upstream 233943 60572370 ~ 60575197 (-)
G1192815 NA other upstream 303248 60641675 ~ 60642185 (-)
G1193386 NA other upstream 937318 61275745 ~ 61277658 (-)

Expression


Co-expression Network