G1192531


Basic Information

Item Value
gene id G1192531
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 60367628 ~ 60370340 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1360485
GTAAAAACAAGTTGGCTACTATTAGCAACAAACAtttccattcctctctcttttAAACTATTTGGAGAATTTTGCAATTCTTCCACATCATTGTTttgtttaaagtattttttattaaAGGGTGAATAGTCAATTGcattttcaaataaaataattactTTAGTGAGATCAGGTAAAATGGAAAACgttttgcaatgaaaacaaatgtttcttattggacaaatttACATTAGTTCTGCCCAGTTTTGGCCCGTTTACTTTTGTATGGTTCCTAGTAAATACAGCCCTGATAATCCCACTGTGTTAAATTAAATATTAGTCTACATTTTCAAATGGAGCTGTTCTTTTCATTATACAGCATCTGAGAAATAAGACCACTTTATATAAAGTGCAGCATTCTTAATCTTACCTAGCCTGCACATGCAGCAGGAATTTTTCATTCGTTTGGTATCTACAATAGACTTTGTGTGCAATAACAATATCCGACTTCAGCACAGTCTTAACTCCAGGTCTTCTTATTTGAGTGTATAAAGTCTACAAACTTATCTAAGGTCCACTATATGCATGTTTTAATTATTCACATATAAAATGTGGCCTCCAACACTGAAAAACAAGTCAAATGTTCTTTATTATTACTACTGGAAACATAGTCAATATAGATATgcggtgccttcggaaagtattcagaccccttgacattttccacattttgttaggttacagcctcattctaaaatggattaaatcgttttttccccctcaatctacacacaataccccataatggcaaaacaaaaacaggttcagAAGATATTTTCTCCTCGCTCCCCttttatatcacatttacataagtattcagaccctgtactgagtactttgttgaagcacctatggcagagattacagcctcgagtcttcttggctatgacgctacaagcttggaacacctgtatttggggagtttctcccattcttctctgaagatcctctcaagcactgtcaggttggatggggagcgttgctgtacagctattttcaggtctctccagagatgttagattgggttcaagtccgggccctgactcggccactcaaggacattgagacttgtcccaaagccactcctgtgttgtgttggctgtgtgcttaggctcgTAGTCCTGTTGAAAGTTgaaacttcgccccagtctgaggtcctgagggttctggagcaggttttcatcaaggatcgatctgtactttgctctgttcatctatccctcaatcctgactagtctcccagtccctgcctctgacaAACATCCCCCccgaagggatggtgccagtttccTCCAGACATTACTTTTGGCATTCaccccaaagagttcaatcttggtttcatcagacaatagaatgttgtttctcatgggctgagagtctttaggtgcctttcgcaaactccaagcggactgtcatgtgccttttactgaggagtggcttccgtctggccactctaccataaaggcctgattagtagagtgctgcagagctggtagtccttctggaaggttctcccatctccacagaggatctccagagctctgtcagagtgaccatcgggttcttggtcacctccctgaccaaggtccttatCCCCCAACTGCTTAGTTTtgtcgggcggccagctctaggaagagtctctgtgcctcgacacaaatttgtctctgagctctacggacaattctttcaacctcatggcttggtttttgctctgacatgcactgtcaactgtgggaccttaatatagacaggtgtgtgcctttccaaatcatatccaatcaatttaatttaccacaggtggactccaatcaaaatGTAGAAACATcgaagatgatcaatggaaacaggatgcacttaaACTCCATTTAGAGTCTTATAGAAAAgttctgaacacttatgtaaatgaggtatctGTTTGtggtttaatacatttacaaaaatgtctaaaaacctgtttttgcgttgtcattctggggttgtgtgtagattgatttttatttatttaatccattttagaatacggctgaaacgtaacaatgtggaaaaagtaaaaggggtctgaatactttctgaaggcactttataaTACACAGCTGGAGACATTTTACACTTCTGCATTGTGATACCAAAACAATGTGCTAAATGTATAGTTTGTGTATTTAAAATCTGATATTGTCCACAATGATCAACCTAACATCTTGCAGGGAAGATAAATTGTGGATTAGCATGAAAATATATTATTGCCGCTAAGACGAAGTTATTGAATGATTttaatgaaatatatatatatatattcttttttacagtaccagtctaacCAGTACCattctctaaccagaatagaaagaggagtgagaggccccggtgcacaactgggcaagagacaagtacattagtgtctagtttgagaaacagacgcctcacaagtcctcaactggcagcttcattaaatagtacccacaaaacaccagtctcaacatcaacagtgaagaggcgacaacGGGATccgtccttctaggcagagttcctcttttcagtgtctgttcttttgcccatcttaatcttttatttttattggccagtctgagatatggctttttctttgcaactctgcctagaaggccagcatcccgtggtcacctcttcactgttgacgttgagactggtgttttgt

Function

NR:

description
PREDICTED: zinc finger protein 135-like isoform X1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1360485 True 2713 lncRNA 0.40 1 60367628 60370340

Neighbor

gene id symbol gene type direction distance location
LOC110486987 cyp2k4 coding downstream 29201 60274725 ~ 60367022 (-)
LOC110486988 LOC106606456 coding downstream 104799 60260720 ~ 60262829 (-)
LOC118938340 NA coding downstream 170908 60192912 ~ 60196843 (-)
LOC110516349 cfap70 coding downstream 409422 59938111 ~ 59958206 (-)
LOC110512532 LOC106606500 coding downstream 435299 59921477 ~ 59932329 (-)
LOC118936527 LOC106606405 coding upstream 7513 60377853 ~ 60386961 (-)
LOC110486979 LOC106606406 coding upstream 33277 60403617 ~ 60408720 (-)
LOC110486976 LOC106606471 coding upstream 94186 60460043 ~ 60565934 (-)
LOC110538808 LOC106601873 coding upstream 636486 61005929 ~ 61026251 (-)
LOC110486965 LOC100135781 coding upstream 1175925 61546265 ~ 61550711 (-)
G1192533 NA non-coding downstream 27423 60296126 ~ 60340205 (-)
G1192619 NA non-coding downstream 68725 60208767 ~ 60298903 (-)
G1192606 NA non-coding downstream 123231 60182643 ~ 60244397 (-)
G1192629 NA non-coding downstream 133658 60233141 ~ 60233970 (-)
G1192673 NA non-coding upstream 11001 60381341 ~ 60381568 (-)
G1192674 NA non-coding upstream 16118 60386458 ~ 60386673 (-)
G1192705 NA non-coding upstream 87260 60457600 ~ 60458463 (-)
G1192706 NA non-coding upstream 88382 60458722 ~ 60459300 (-)
G1192535 NA other downstream 53074 60219166 ~ 60314554 (-)
G1192519 NA other downstream 159358 60205782 ~ 60208270 (-)
LOC110516720 adcy9 other downstream 897337 59382826 ~ 59472065 (-)
G1192757 NA other upstream 202030 60572370 ~ 60575197 (-)
G1192815 NA other upstream 271335 60641675 ~ 60642185 (-)
G1193386 NA other upstream 905405 61275745 ~ 61277658 (-)

Expression


Co-expression Network