G1192619


Basic Information

Item Value
gene id G1192619
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 60208767 ~ 60298903 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1360584
TCGGGTGCATCTCAAATTCAGTACCATTGGACAGCAagataataaactaaagcacTGATCATCAGGAATGAGATCAGAATGAGTGCTAAGGCCTACATTTGAACACAACCGCGGAAGCTTCAGGTATTTGTGGTGCTaacgaacagggatgtaaacacatttgtgctcagattttatgaaaaataagctttttctgcATACGGAACATTTCcggcatcttttatttcagctcatgaaacatgggaccaacactttacatgttgtgtttatatttttgttcattatattTACGATGCAAGTGTGGGTATTCAGACCTTGAGGGGAGTGTCCACAGAAACTACTTGACACGTTCTATAGATACTGATAAAGACAACTTGAAGTCAGTTTACTTTTGAGGTTAAAGAACACAAGTTATGTTTTGTGGATAAAATGTGTCAGAGGTTTCTTCTGTCaacaaacattatttttttaaactgtagCAAATGGAACACTTTGTATTTGCCACTTCAACATTTATTAACAAATGCAATTGGAACACTTTGTATTTGCCACTTCAACATTTATTAACAAATGCAATGCTTGAGTCATGAAGTTCTCGGGAAGAATAATCTCTAGTCACTCAAAAGCCAGAGATGTGGATCTGATTACAAATTAAATGAAAAGCTGCCATACCTTTGTAGATTTGTCAGTAGCACCATGGGTAGTGAACCTCATTTGATCAATTTAAAGGAGAGATGAGAAATACTAACCCATCGAGAGTGGGAGGTTGGGGAAGCAGATCTCCACTCAAATCCTTGAAAATCTTAAAAAAGAAATGACAAAAACTTTTGGGGAGCAAATTAAATCGTGGGTCGACTTCTGGCTTAGACTACACATGATATACTTATATAGGACTATGATGAAAAAGCATATTTTAAATGTTGTATTTTAATGAAGTATCTGTATATGCAGGGCAAGGTGACTTCTGTTAGTTATGCTTCCCTCTATTCAAGAAGCGGTTTTCAGACTTTTACAGAGATTGGAAATGTATTCTGTCTTTGGAATGTGTAAACTGACCTTTGTAACCTCGTGGCAGAGGGATTATTGGGATCCTGAAGATAGTTTTACCAGACCATTTACCTGATCATCATTGACTCACACtaaacaaataaaacatcaaATGTGGAACACC
>TU1360585
TTATGTTTTAAACTGTAGCAAATGAAACACTATGCATTTGCCACTTCAACATTTATTAACAAATGCAATGCTTGAGTCATGAAGTTCTCGGGAAGAATAATCTCTAGTCACTCAAAAGCCAGAGATGTGGATCTGATTACAAATTAAATGAAAAGCTGCCATACCTTTGTAGATTTGTCAGTAGCACCATGGGTAGTGAACCTCATTTGATCAATTTAAAGGAGAGATGAGACATACTAACCCATCGAGAGTGGGAGGTTGGGGAAGCAGATCTCCACTCAAATCCTTGAAAATCTTAAAAAAGAAATGACAAAAACTTTTGGGGAGCATATTAAATCGTGGGTCAACTTCTGGCTTAGACTACACATGATATACAAATATAGGACTATGATGAAAAAGCATATTTTAAATGTTGTATTTTAATGAAGTATCTGAATATGCAGGGCTAAGGTGACTTCTGTTAGTTATGCTTCCCTCTATTCAAGAAGAGGTTTTCAGACTTTTACAGAGATTGGAAATGTATTCTGTCTTTGGAATGTGTAAACTGACCTTTGTGACCTCAAGTGGCAGAGGGATTATTGGGATCCAGCCTCACCTGTTCTTTCTCCCACTGTCTGAACTGAAGATAGTTTTACCAGACCATTTACCTGATCATCATTGACTCACACtaaacaaataaaacatcaaATGTGGAACACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1360584 False 1171 lncRNA 0.36 2 60208767 60209970
TU1360585 True 699 lncRNA 0.37 2 60208767 60298903

Neighbor

gene id symbol gene type direction distance location
LOC118938340 NA coding downstream 12047 60192912 ~ 60196843 (-)
LOC110516349 cfap70 coding downstream 250561 59938111 ~ 59958206 (-)
LOC110512532 LOC106606500 coding downstream 276438 59921477 ~ 59932329 (-)
LOC110515614 LOC105008474 coding downstream 296699 59651360 ~ 59912068 (-)
LOC110487009 LOC106601835 coding downstream 559853 59644584 ~ 59648914 (-)
LOC118936527 LOC106606405 coding upstream 78950 60377853 ~ 60386961 (-)
LOC110486979 LOC106606406 coding upstream 104714 60403617 ~ 60408720 (-)
LOC110486976 LOC106606471 coding upstream 165623 60460043 ~ 60565934 (-)
LOC110538808 LOC106601873 coding upstream 707923 61005929 ~ 61026251 (-)
LOC110486965 LOC100135781 coding upstream 1247362 61546265 ~ 61550711 (-)
G1192532 NA non-coding downstream 76657 60129737 ~ 60132110 (-)
G1192575 NA non-coding downstream 96494 60111352 ~ 60112273 (-)
G1192574 LOC106595676 non-coding downstream 97691 60109473 ~ 60111076 (-)
G1192477 NA non-coding downstream 218685 59988009 ~ 59990082 (-)
G1192478 NA non-coding downstream 220941 59986742 ~ 59987826 (-)
G1192531 NA non-coding upstream 68725 60367628 ~ 60370340 (-)
G1192673 NA non-coding upstream 82438 60381341 ~ 60381568 (-)
G1192674 NA non-coding upstream 87555 60386458 ~ 60386673 (-)
G1192705 NA non-coding upstream 158697 60457600 ~ 60458463 (-)
G1192519 NA other downstream 497 60205782 ~ 60208270 (-)
LOC110516720 adcy9 other downstream 738476 59382826 ~ 59472065 (-)
LOC110485268 LOC106601889 other downstream 894484 59289251 ~ 59380900 (-)
G1192205 NA other downstream 932918 59275141 ~ 59275849 (-)
G1192757 NA other upstream 273467 60572370 ~ 60575197 (-)
G1192815 NA other upstream 342772 60641675 ~ 60642185 (-)
G1193386 NA other upstream 976842 61275745 ~ 61277658 (-)

Expression


Co-expression Network