Gene
RNA
| Item | Value |
|---|---|
| gene id | G1192574 |
| gene name | LOC106595676 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 60109473 ~ 60111076 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: ATP-binding cassette sub-family A member 3-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1360533 | True | 417 | lncRNA | 0.52 | 3 | 60109473 | 60111076 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516349 | cfap70 | coding | downstream | 151267 | 59938111 ~ 59958206 (-) |
| LOC110512532 | LOC106606500 | coding | downstream | 177144 | 59921477 ~ 59932329 (-) |
| LOC110515614 | LOC105008474 | coding | downstream | 197405 | 59651360 ~ 59912068 (-) |
| LOC110487009 | LOC106601835 | coding | downstream | 460559 | 59644584 ~ 59648914 (-) |
| LOC118938337 | LOC105021644 | coding | downstream | 566354 | 59523790 ~ 59543119 (-) |
| LOC118938340 | NA | coding | upstream | 81836 | 60192912 ~ 60196843 (-) |
| LOC110486988 | LOC106606456 | coding | upstream | 149644 | 60260720 ~ 60262829 (-) |
| LOC110486987 | cyp2k4 | coding | upstream | 163649 | 60274725 ~ 60367022 (-) |
| LOC118936527 | LOC106606405 | coding | upstream | 266777 | 60377853 ~ 60386961 (-) |
| LOC110486979 | LOC106606406 | coding | upstream | 292541 | 60403617 ~ 60408720 (-) |
| G1192477 | NA | non-coding | downstream | 119391 | 59988009 ~ 59990082 (-) |
| G1192478 | NA | non-coding | downstream | 121647 | 59986742 ~ 59987826 (-) |
| G1192479 | NA | non-coding | downstream | 123269 | 59983524 ~ 59986204 (-) |
| G1192480 | LOC106601842 | non-coding | downstream | 126342 | 59982334 ~ 59983131 (-) |
| G1192473 | NA | non-coding | downstream | 139151 | 59969263 ~ 59970322 (-) |
| G1192575 | NA | non-coding | upstream | 276 | 60111352 ~ 60112273 (-) |
| G1192532 | NA | non-coding | upstream | 18661 | 60129737 ~ 60132110 (-) |
| G1192606 | NA | non-coding | upstream | 71567 | 60182643 ~ 60244397 (-) |
| G1192619 | NA | non-coding | upstream | 97691 | 60208767 ~ 60298903 (-) |
| G1192625 | NA | non-coding | upstream | 111606 | 60222682 ~ 60227599 (-) |
| LOC110516720 | adcy9 | other | downstream | 639182 | 59382826 ~ 59472065 (-) |
| LOC110485268 | LOC106601889 | other | downstream | 795190 | 59289251 ~ 59380900 (-) |
| G1192205 | NA | other | downstream | 833624 | 59275141 ~ 59275849 (-) |
| G1192158 | NA | other | downstream | 988317 | 59119541 ~ 59121156 (-) |
| G1192082 | NA | other | downstream | 1200241 | 58906153 ~ 58909232 (-) |
| G1192519 | NA | other | upstream | 94706 | 60205782 ~ 60208270 (-) |
| G1192535 | NA | other | upstream | 108090 | 60219166 ~ 60314554 (-) |
| LOC110486976 | LOC106606471 | other | upstream | 446706 | 60460043 ~ 60565934 (-) |
