Gene
RNA
| Item | Value |
|---|---|
| gene id | G1190119 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 56802674 ~ 56802917 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1357462 | True | 244 | lncRNA | 0.48 | 1 | 56802674 | 56802917 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110515093 | LOC106606674 | coding | downstream | 551749 | 56226179 ~ 56250925 (-) |
| LOC110539043 | LOC106601829 | coding | downstream | 598864 | 56125290 ~ 56203810 (-) |
| LOC110485237 | LOC106606659 | coding | downstream | 691703 | 56088292 ~ 56110984 (-) |
| LOC110486851 | LOC106606669 | coding | downstream | 765852 | 56029421 ~ 56036822 (-) |
| LOC110538789 | LOC106606674 | coding | downstream | 1250174 | 55533247 ~ 55574537 (-) |
| LOC110486859 | srebf1 | coding | upstream | 108448 | 56911365 ~ 56957646 (-) |
| LOC110486860 | tom1l2 | coding | upstream | 159160 | 56960592 ~ 57007990 (-) |
| LOC110486894 | LOC106601810 | coding | upstream | 251536 | 57054453 ~ 57085521 (-) |
| nduba | LOC106601814 | coding | upstream | 291395 | 57094312 ~ 57099778 (-) |
| LOC110485244 | LOC106601809 | coding | upstream | 309992 | 57112909 ~ 57129442 (-) |
| G1190108 | NA | non-coding | downstream | 1020 | 56798467 ~ 56801654 (-) |
| G1190109 | NA | non-coding | downstream | 14070 | 56782095 ~ 56788604 (-) |
| G1190104 | NA | non-coding | downstream | 22936 | 56772866 ~ 56779738 (-) |
| G1190101 | NA | non-coding | downstream | 83345 | 56703298 ~ 56719329 (-) |
| G1189568 | NA | non-coding | downstream | 227226 | 56575194 ~ 56575448 (-) |
| G1190122 | NA | non-coding | upstream | 4490 | 56807407 ~ 56807638 (-) |
| G1190123 | NA | non-coding | upstream | 4772 | 56807689 ~ 56808113 (-) |
| G1190175 | NA | non-coding | upstream | 155791 | 56958708 ~ 56958908 (-) |
| G1190180 | NA | non-coding | upstream | 189420 | 56992337 ~ 56992798 (-) |
| G1189660 | LOC106601786 | other | downstream | 128436 | 56670293 ~ 56674238 (-) |
| G1189279 | LOC106601786 | other | downstream | 886789 | 55912224 ~ 55915885 (-) |
| LOC110485238 | LOC106601829 | other | downstream | 1347440 | 55434816 ~ 55509918 (-) |
| LOC110516592 | LOC106601772 | other | downstream | 1589959 | 55209614 ~ 55242150 (-) |
| G1190199 | LOC106601813 | other | upstream | 286254 | 57089171 ~ 57089915 (-) |
| G1190405 | NA | other | upstream | 693071 | 57495988 ~ 57499155 (-) |
| LOC110486915 | LOC106606556 | other | upstream | 896334 | 57698059 ~ 57706813 (-) |
| G1190628 | NA | other | upstream | 1163220 | 57964952 ~ 57994099 (-) |
