G1192387


Basic Information

Item Value
gene id G1192387
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 59736548 ~ 59739126 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1360282
CCATCACCACttcactctccatctcatctctaacccatcaccacttcactctccatctcatctctgacccatcaccacttcactctccatctctaacccatcaccacttcactctccatctcatctctgacccatcaccacttcactctccatctcatctctaacccatcaccacttcactctccatctcatctctaacccatcaccacttcactatccatctctaacccatcacctcttcactctccatctctaacccatcaccacttcactctccatctctaacccatcacctctttactctccatctctaacccatcACCACTTCACTCTTCATCTCATCTCTGACCCATCACCACttcactctccatctcatctctaacccatcaccacttcactatccatctctaacccatcacctcttcactctccatctctaacccatcACCTCTCCATCGCATCTCTAACCCATCACCACTTCACTCTCCATCGCATCTCTAACCCATCACCTCTTCACTCTCCATCGCATGTCTAACCCATCACCTCTTCACTCTCCATCGCATGTCTAACCCATCACctcttcactctccatctctaacccatcACCACTTCACTCTTCATCTCATCTCTGACCCATCACCACttcactctccatctcatctctaacCCATCACCACTTCACTATTCATCTCTAACCATCACctcttcactctccatctctaacccatcACCTCTCCATCGCATGTCTAACCCATCAACTCTTCACTCGCCATCTCATGTCTAACCCATCACctcttcactctccatctctaacccatcACCACTTCACTCTTCATCTCATCTCTGACCCATCACcacttcactctccatctctaacccatcaccacttcactctccatctcatctctgacccatcaccacttcactctccatctcatctctaacccatcaccacttcactctccatctcatctataacccATCACCTCTTcaccctccatctcatctctaacccatcacctcttcactctccatctcatctctaacTCATCACCTCttcactctccatctcatctctaacccatcaccacttcactctccatctcatctctaacccatcacctcttcactctccatctctgacccatcacctcttcactctccatctcatctctaacccatccccacttcactctccatctctaacccatcACCTCTTCACTCTCCATCTCATTTCTGACCATCACCTTttcactctccatctcatctctaacccatctctctctcatctctccctctcgctccctctctctctcatctctctcatctctctctctttctcgactgtctctctctcaaatttcctcctactccctctgtctctttctgtttctctccttagTCCTCCAccacgatctctctctctctctctctctcccactctctccctctctctctcgactgtTGACTGTCCCagttctctcttcctgtctgtgtgaCTTATGACTTCAGTCCTCCCCAGGCTGTTGAGAGCAAAGCAGTGTGGCGTTAAAGTTTCAACCAGAGGCAACATGTCCACATTAGAAACAACAAGATCCCCATATTGAAGATGGCCTGTGTGGGATACATGGAGCGAAGTAGAGAAAACACTGGATGCTGTCCGATGTTGATGTTTGATTTTTCAATAGTCACCCTTAGGACTTCTAAGATTCTTAGAAAGAGTCTTCTGCTGATTTAATATGTGACCTGACTAGTCCTGACTTGTATCACAATCAcaactgggtcatgttcattagggcacagcATAGCAAAGTATTTAGAAATGGAGAATGGAAACAAGCGTTTCTTAATGGACAAACTCTGATAGAACTTGCCAGTTTTGTCTTCAGTTTTGTGCCTTGTGAATACGACCAGGTTTTACTGACGTTGATCCTATAATACGGTTGAAGTTTAGTTTTACACACACTTCTCTGTGCGTATGGTAGCTGATAACGCCGCTATTAGCAGTGACTGAAATAGACCCTGGGGAAACGAGGGGCCAAGGACCTCAAACATACAGTGACTCAACCAGAgctggtgtgtatgtgtttatggtaaacgcgtgtgtgtgtgcgtgcgtgtgtgtgtgtactagtcaGCACTTCCTGTGATTTCAGTTGTGCCTACTGACCCTAAGGCAgacacagtagcagcagcagcacatcAGCTAACCATTCCCCTAATCATTACTCTTTAACTTATCATTAAATCTATTTGTGGGTAAACGTTACGAGTTAATGTTCATCTGACCATTTGTTTCTTTAGTTGAACTTCCATTAGTCATTAATACCAATGATTAAATATCTGACCCTCCAGTCAAGGTTTAAGGCTGGGGTCACACTAAACTAAGTATGAGTGTTCTTTGTGTGTGCAGGCCTAGTCACTGTTTGTAGTGACCGTTGCAGTCCCTTCTCTCttaatctatttctctctcttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1360282 True 2477 lncRNA 0.46 2 59736548 59739126

Neighbor

gene id symbol gene type direction distance location
LOC110487009 LOC106601835 coding downstream 87634 59644584 ~ 59648914 (-)
LOC118938337 LOC105021644 coding downstream 193429 59523790 ~ 59543119 (-)
LOC110487012 LOC106606491 coding downstream 219608 59481481 ~ 59516940 (-)
LOC110516720 adcy9 coding downstream 264483 59382826 ~ 59472065 (-)
LOC110485268 LOC106601889 coding downstream 355648 59289251 ~ 59380900 (-)
LOC110512532 LOC106606500 coding upstream 182351 59921477 ~ 59932329 (-)
LOC110516349 cfap70 coding upstream 198985 59938111 ~ 59958206 (-)
LOC118938340 NA coding upstream 453786 60192912 ~ 60196843 (-)
LOC110486988 LOC106606456 coding upstream 521594 60260720 ~ 60262829 (-)
LOC110486987 cyp2k4 coding upstream 535599 60274725 ~ 60367022 (-)
G1192380 NA non-coding downstream 11397 59722063 ~ 59725151 (-)
G1192381 NA non-coding downstream 13131 59721897 ~ 59723417 (-)
G1192355 NA non-coding downstream 103624 59632023 ~ 59632924 (-)
G1192356 NA non-coding downstream 105093 59630994 ~ 59631455 (-)
G1192357 NA non-coding downstream 109870 59625821 ~ 59626678 (-)
G1192391 NA non-coding upstream 12514 59751640 ~ 59752325 (-)
G1192396 NA non-coding upstream 22893 59762019 ~ 59764877 (-)
G1192400 NA non-coding upstream 36578 59775704 ~ 59776419 (-)
G1192384 NA non-coding upstream 41884 59781010 ~ 59783540 (-)
G1192408 NA non-coding upstream 62881 59802007 ~ 59802539 (-)
G1192205 NA other downstream 460699 59275141 ~ 59275849 (-)
G1192158 NA other downstream 615392 59119541 ~ 59121156 (-)
G1192082 NA other downstream 827316 58906153 ~ 58909232 (-)
G1192519 NA other upstream 466656 60205782 ~ 60208270 (-)
G1192535 NA other upstream 480040 60219166 ~ 60314554 (-)
LOC110486976 LOC106606471 other upstream 818656 60460043 ~ 60565934 (-)

Expression


Co-expression Network