Gene
RNA
| Item | Value |
|---|---|
| gene id | G1347847 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 17617971 ~ 17618254 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1540865 | True | 201 | lncRNA | 0.40 | 2 | 17617971 | 17618254 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491483 | LOC106579330 | coding | upstream | 14369 | 17596160 ~ 17623382 (+) |
| LOC110491484 | sost | coding | upstream | 119993 | 17490773 ~ 17497981 (+) |
| dusp3a | LOC106579333 | coding | upstream | 151503 | 17442743 ~ 17466468 (+) |
| LOC110491479 | LOC106579387 | coding | upstream | 202586 | 17412299 ~ 17415385 (+) |
| LOC110491478 | LOC106579335 | coding | upstream | 208115 | 17405145 ~ 17409856 (+) |
| LOC110491481 | LOC106579328 | coding | downstream | 20727 | 17638981 ~ 17668199 (+) |
| LOC110491490 | LOC106579325 | coding | downstream | 376101 | 17994355 ~ 18024642 (+) |
| cdk5r1b | LOC106579323 | coding | downstream | 470228 | 18088482 ~ 18095827 (+) |
| tbkbp1 | tbkbp1 | coding | downstream | 633576 | 18251830 ~ 18323632 (+) |
| tbx21 | tbx21 | coding | downstream | 761270 | 18379524 ~ 18396021 (+) |
| G1347655 | NA | non-coding | upstream | 147843 | 17469904 ~ 17470128 (+) |
| G1347476 | NA | non-coding | upstream | 236780 | 17380429 ~ 17381191 (+) |
| G1347471 | NA | non-coding | upstream | 260206 | 17356405 ~ 17357765 (+) |
| G1347898 | NA | non-coding | downstream | 59613 | 17677867 ~ 17678075 (+) |
| G1347904 | dhx8 | non-coding | downstream | 66224 | 17684478 ~ 17691398 (+) |
| G1347913 | NA | non-coding | downstream | 82209 | 17700463 ~ 17700675 (+) |
| G1347915 | LOC106579329 | non-coding | downstream | 95602 | 17713856 ~ 17717390 (+) |
| G1348134 | NA | non-coding | downstream | 258460 | 17876714 ~ 17877779 (+) |
| LOC110492842 | LOC106579341 | other | upstream | 343991 | 17235828 ~ 17305959 (+) |
| LOC110491464 | LOC106579031 | other | upstream | 461301 | 17152137 ~ 17156699 (+) |
| G1346758 | NA | other | upstream | 671727 | 16945928 ~ 16946244 (+) |
| G1345431 | NA | other | upstream | 2074434 | 15542391 ~ 15543537 (+) |
| G1348897 | LOC106579309 | other | downstream | 936923 | 18555177 ~ 18555452 (+) |
| LOC110491516 | LOC106589273 | other | downstream | 1134369 | 18682058 ~ 18760420 (+) |
| LOC110491534 | LOC105006846 | other | downstream | 1520773 | 19138817 ~ 19141680 (+) |
| G1350066 | NA | other | downstream | 2118908 | 19737162 ~ 19738034 (+) |
| G1350275 | NA | other | downstream | 2412476 | 20030730 ~ 20037978 (+) |
