Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1540865 |
| length | 201 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G1347847 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 17617971 ~ 17618254 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1540690 | lncRNA | upstream | 119990 | 17496444 ~ 17497981 (+) | True | LOC110491484 |
| TU1540671 | lncRNA | upstream | 147843 | 17469904 ~ 17470128 (+) | True | G1347655 |
| TU1540495 | lncRNA | upstream | 151508 | 17442743 ~ 17466463 (+) | True | dusp3a |
| TU1540467 | lncRNA | upstream | 236780 | 17380429 ~ 17381191 (+) | True | G1347476 |
| TU1540458 | lncRNA | upstream | 260206 | 17356405 ~ 17357765 (+) | True | G1347471 |
| TU1540920 | lncRNA | downstream | 59613 | 17677867 ~ 17678075 (+) | True | G1347898 |
| TU1540926 | lncRNA | downstream | 66224 | 17684478 ~ 17691398 (+) | True | G1347904 |
| TU1540935 | lncRNA | downstream | 82209 | 17700463 ~ 17700675 (+) | True | G1347913 |
| TU1540937 | lncRNA | downstream | 95602 | 17713856 ~ 17717390 (+) | True | G1347915 |
| TU1541188 | lncRNA | downstream | 258460 | 17876714 ~ 17877779 (+) | True | G1348134 |
| XM_021564967.2 | mRNA | upstream | 14369 | 17596160 ~ 17603602 (+) | False | LOC110491483 |
| XM_021564968.2 | mRNA | upstream | 119993 | 17490773 ~ 17497978 (+) | False | LOC110491484 |
| XM_036946368.1 | mRNA | upstream | 151503 | 17447038 ~ 17466468 (+) | False | dusp3a |
| XM_021564970.2 | mRNA | upstream | 154295 | 17447043 ~ 17463676 (+) | False | dusp3a |
| XM_021564961.2 | mRNA | upstream | 202586 | 17412299 ~ 17415385 (+) | True | LOC110491479 |
| XM_021564963.2 | mRNA | downstream | 20727 | 17638981 ~ 17668199 (+) | False | LOC110491481 |
| XM_036946366.1 | mRNA | downstream | 21443 | 17639697 ~ 17668199 (+) | True | LOC110491481 |
| XM_021564973.2 | mRNA | downstream | 376101 | 17994355 ~ 18024642 (+) | False | LOC110491490 |
| XM_021564974.2 | mRNA | downstream | 391773 | 18010027 ~ 18024642 (+) | False | LOC110491490 |
| XM_021564978.2 | mRNA | downstream | 470228 | 18088482 ~ 18095827 (+) | False | cdk5r1b |
| TU1540858 | other | upstream | 14500 | 17596719 ~ 17603471 (+) | True | LOC110491483 |
| TU1540371 | other | upstream | 343991 | 17236283 ~ 17273980 (+) | False | LOC110492842 |
| TU1539740 | other | upstream | 461301 | 17155454 ~ 17156670 (+) | True | LOC110491464 |
| TU1539652 | other | upstream | 671727 | 16945928 ~ 16946244 (+) | True | G1346758 |
| TU1538191 | other | upstream | 2074434 | 15542391 ~ 15543537 (+) | True | G1345431 |
| TU1542039 | other | downstream | 936923 | 18555177 ~ 18555452 (+) | True | G1348897 |
| TU1542100 | other | downstream | 1134369 | 18752623 ~ 18760420 (+) | False | LOC110491516 |
| TU1542335 | other | downstream | 1520773 | 19139027 ~ 19141677 (+) | True | LOC110491534 |
| TU1543395 | other | downstream | 2118908 | 19737162 ~ 19738034 (+) | True | G1350066 |
| TU1543613 | other | downstream | 2412476 | 20030730 ~ 20037978 (+) | True | G1350275 |
