Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1540935 |
| length | 213 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G1347913 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 17700463 ~ 17700675 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1540926 | lncRNA | upstream | 9065 | 17684478 ~ 17691398 (+) | True | G1347904 |
| TU1540920 | lncRNA | upstream | 22388 | 17677867 ~ 17678075 (+) | True | G1347898 |
| TU1540859 | lncRNA | upstream | 77081 | 17596180 ~ 17623382 (+) | False | LOC110491483 |
| TU1540865 | lncRNA | upstream | 82209 | 17617971 ~ 17618254 (+) | True | G1347847 |
| TU1540690 | lncRNA | upstream | 202482 | 17496444 ~ 17497981 (+) | True | LOC110491484 |
| TU1540937 | lncRNA | downstream | 13181 | 17713856 ~ 17717390 (+) | True | G1347915 |
| TU1541188 | lncRNA | downstream | 176039 | 17876714 ~ 17877779 (+) | True | G1348134 |
| TU1541200 | lncRNA | downstream | 184386 | 17885061 ~ 17885414 (+) | True | G1348146 |
| TU1541222 | lncRNA | downstream | 201187 | 17901862 ~ 17902105 (+) | True | G1348168 |
| TU1541232 | lncRNA | downstream | 206287 | 17906962 ~ 17907194 (+) | True | G1348178 |
| XM_021564963.2 | mRNA | upstream | 32264 | 17638981 ~ 17668199 (+) | False | LOC110491481 |
| XM_036946366.1 | mRNA | upstream | 32264 | 17639697 ~ 17668199 (+) | True | LOC110491481 |
| XM_021564967.2 | mRNA | upstream | 96861 | 17596160 ~ 17603602 (+) | False | LOC110491483 |
| XM_021564968.2 | mRNA | upstream | 202485 | 17490773 ~ 17497978 (+) | False | LOC110491484 |
| XM_021564970.2 | mRNA | upstream | 236787 | 17447043 ~ 17463676 (+) | False | dusp3a |
| XM_021564973.2 | mRNA | downstream | 293680 | 17994355 ~ 18024642 (+) | False | LOC110491490 |
| XM_021564974.2 | mRNA | downstream | 309352 | 18010027 ~ 18024642 (+) | False | LOC110491490 |
| XM_021564978.2 | mRNA | downstream | 387807 | 18088482 ~ 18095827 (+) | False | cdk5r1b |
| XM_036946373.1 | mRNA | downstream | 551155 | 18251830 ~ 18323632 (+) | True | tbkbp1 |
| NM_001195793.1 | mRNA | downstream | 678849 | 18379524 ~ 18396021 (+) | True | tbx21 |
| TU1540858 | other | upstream | 96992 | 17596719 ~ 17603471 (+) | True | LOC110491483 |
| TU1540371 | other | upstream | 426483 | 17236283 ~ 17273980 (+) | False | LOC110492842 |
| TU1539740 | other | upstream | 543793 | 17155454 ~ 17156670 (+) | True | LOC110491464 |
| TU1539652 | other | upstream | 754219 | 16945928 ~ 16946244 (+) | True | G1346758 |
| TU1538191 | other | upstream | 2156926 | 15542391 ~ 15543537 (+) | True | G1345431 |
| TU1542039 | other | downstream | 854502 | 18555177 ~ 18555452 (+) | True | G1348897 |
| TU1542100 | other | downstream | 1051948 | 18752623 ~ 18760420 (+) | False | LOC110491516 |
| TU1542335 | other | downstream | 1438352 | 19139027 ~ 19141677 (+) | True | LOC110491534 |
| TU1543395 | other | downstream | 2036487 | 19737162 ~ 19738034 (+) | True | G1350066 |
| TU1543613 | other | downstream | 2330055 | 20030730 ~ 20037978 (+) | True | G1350275 |
