XLOC_033014 (tns2b)


Basic Information

Item Value
gene id XLOC_033014
gene name tns2b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 39039480 ~ 39051319 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064148
GTAACTTATTGAGTACACCCACACATGCAGATGCGAGGCGAGTGCTGCACGGACTGAGCGGATGTAAAGAAGCAAGAACAGATGCTTTGTTGTCTTATTCTGCCAATGAAAGATGGAGATGAGGAGAAACAGAGGGCCAAACGCTGCTGTCCTGGGAACTTaaggtgcatgtgtgtgtttgtgtgtgtgagagagaaggcTCCCACTGGGTGTGCAGGGCTGGAGTGCCAGAGAAGAGGAAGGGTCTGACGTAACCCTGCCAAAAACAGCTGCGAGTCGGAGGAGGGCGTTACATTAGTGTGCATGTGAGGGGCAAGAGACTGTCAGAGGGAGGACACCCGAGAGACGCCGAGAGGGACACTTTGGAAGTGGGAGAGAATGCGTGGAAAAGAAGGTTGGAGAGACATGTTTCTGTGTAGGAACCGGACGCTGAGACGTTGAGGAACAAGGAGCAACCTGGACTGGAGGTTAAGGAAAGCAGGGGCTAAGAAAGTAAGAGGAGAAGGAAAGAAGATCTCAGGAAGAATAAAGCAGGAGAAGAATAATGGGGTGTATCTTCAGCAAGCAGCAGTGGGAAAAAGAGACAAGTTCTCAACCCTCAGACCCCCCAAAAACACGAGACCATGCTGAGGATGCAGAGATCCTCAGTTTGACAgagTTAGAGAAAATGGGTTCACACTGCTTTAAGGAGAGGAACTTCAAGAAGAAACTTCACTGTGCTGTTTGCAGACAAACACTCGACAGTCTCGGCATGTACTGCAGAGAATGTAAAACTGCAGTGCATAAGAAATGTGAGGAAAAGGTCTCTGTCCCCTGTGAAGCAGTTTCAGATCCT

Function

symbol description
tns2b Predicted to act upstream of or within intracellular signal transduction. Predicted to be located in cell junction. Orthologous to human TNS2 (tensin 2).

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process

KEGG: NA

ZFIN:

id description
ZDB-GENE-101001-5 Predicted to act upstream of or within intracellular signal transduction. Predicted to be located in cell junction. Orthologous to human TNS2 (tensin 2).

Ensembl:

ensembl_id ENSDARG00000068397

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064148 True 835 mRNA 0.49 4 39039480 39051319

Neighbor

gene id symbol gene type direction distance location
XLOC_033013 tns2b coding downstream 1867 39011703 ~ 39037613 (-)
XLOC_033012 vdrb coding downstream 33031 38954733 ~ 39006449 (-)
XLOC_033011 hdac7b coding downstream 108754 38905047 ~ 38930726 (-)
XLOC_033010 cnga3a coding downstream 220898 38791900 ~ 38818582 (-)
XLOC_033009 NA coding downstream 275154 38759546 ~ 38764326 (-)
XLOC_033015 eif4bb coding upstream 13505 39064824 ~ 39080701 (-)
XLOC_033016 stat2 coding upstream 72225 39123544 ~ 39160422 (-)
XLOC_033017 apof coding upstream 110975 39162294 ~ 39167732 (-)
XLOC_033018 c1galt1b coding upstream 139083 39190402 ~ 39199070 (-)
XLOC_033019 os9 coding upstream 151366 39202685 ~ 39218609 (-)
XLOC_033008 CR628341.2 non-coding downstream 441696 38597669 ~ 38597784 (-)
XLOC_033006 CR407584.1 non-coding downstream 681400 38132511 ~ 38358080 (-)
XLOC_033003 BX322552.1 non-coding downstream 1423997 37615366 ~ 37615483 (-)
XLOC_032997 BX324166.3 non-coding downstream 1592337 37447028 ~ 37447143 (-)
XLOC_033024 NA non-coding upstream 440527 39491846 ~ 39521832 (-)
XLOC_033025 CU467856.1 non-coding upstream 473605 39524924 ~ 39525505 (-)
XLOC_033038 NA non-coding upstream 987373 40038692 ~ 40044111 (-)
XLOC_033043 NA non-coding upstream 1121909 40173228 ~ 40182520 (-)
XLOC_033046 NA non-coding upstream 1332105 40383424 ~ 40409125 (-)

Expression


Co-expression Network