XLOC_033055 (CU855953.1)


Basic Information

Item Value
gene id XLOC_033055
gene name CU855953.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 40625304 ~ 40625420 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064240
tgccacagccatatcatcctgcagcccaagactggttactcactgaagctaagcagggctaaaCCTGGTCAGCAACTGGATGGGataccacatgggaaaactaggttgctcttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000112718

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064240 True 117 rRNA 0.50 1 40625304 40625420

Neighbor

gene id symbol gene type direction distance location
XLOC_033054 tspo coding downstream 42051 40578219 ~ 40583253 (-)
XLOC_033053 tomm6 coding downstream 52034 40572545 ~ 40573270 (-)
XLOC_033052 NA coding downstream 143106 40477430 ~ 40482198 (-)
XLOC_033051 crbn coding downstream 158443 40456798 ~ 40466861 (-)
XLOC_033050 vhl coding downstream 170195 40451270 ~ 40455109 (-)
XLOC_033056 NA coding upstream 211 40625631 ~ 40629161 (-)
XLOC_033057 ppil1 coding upstream 22368 40647788 ~ 40659100 (-)
XLOC_033058 dre-mir-429b coding upstream 27709 40653129 ~ 40653238 (-)
XLOC_033059 dre-mir-141 coding upstream 30583 40656003 ~ 40656085 (-)
XLOC_033060 dre-mir-200c coding upstream 30784 40656204 ~ 40656288 (-)
XLOC_033046 NA non-coding downstream 216179 40383424 ~ 40409125 (-)
XLOC_033043 NA non-coding downstream 442784 40173228 ~ 40182520 (-)
XLOC_033038 NA non-coding downstream 581193 40038692 ~ 40044111 (-)
XLOC_033025 CU467856.1 non-coding downstream 1099799 39524924 ~ 39525505 (-)
XLOC_033061 NA non-coding upstream 34534 40659954 ~ 40661324 (-)

Expression


Co-expression Network