RNA id: TCONS_00064240


Basic Information

Item Value
RNA id TCONS_00064240
length 117
RNA type rRNA
GC content 0.50
exon number 1
gene id XLOC_033055
representative True

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 40625304 ~ 40625420 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tgccacagccatatcatcctgcagcccaagactggttactcactgaagctaagcagggctaaaCCTGGTCAGCAACTGGATGGGataccacatgggaaaactaggttgctcttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000184783

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00064236 lncRNA downstream 52072 40572675 ~ 40573232 (-) False XLOC_033053
TCONS_00065208 lncRNA downstream 143106 40477430 ~ 40482198 (-) True XLOC_033052
TCONS_00064226 lncRNA downstream 190322 40432360 ~ 40434982 (-) False XLOC_033048
TCONS_00064227 lncRNA downstream 190387 40432433 ~ 40434917 (-) True XLOC_033048
TCONS_00065207 lncRNA downstream 216179 40383424 ~ 40409125 (-) True XLOC_033046
TCONS_00065209 lncRNA upstream 211 40625631 ~ 40629122 (-) False XLOC_033056
TCONS_00065210 lncRNA upstream 211 40625631 ~ 40629161 (-) True XLOC_033056
TCONS_00065211 lncRNA upstream 28612 40654032 ~ 40659100 (-) False XLOC_033057
TCONS_00065212 lncRNA upstream 34534 40659954 ~ 40661324 (-) True XLOC_033061
TCONS_00065213 lncRNA upstream 230719 40856139 ~ 40863887 (-) False XLOC_033074
TCONS_00064238 mRNA downstream 42051 40578219 ~ 40583253 (-) False XLOC_033054
TCONS_00064239 mRNA downstream 43928 40578497 ~ 40581376 (-) True XLOC_033054
TCONS_00064234 mRNA downstream 52064 40572545 ~ 40573240 (-) False XLOC_033053
TCONS_00064237 mRNA downstream 52083 40572908 ~ 40573221 (-) True XLOC_033053
TCONS_00064233 mRNA downstream 158443 40456798 ~ 40466861 (-) True XLOC_033051
TCONS_00064241 mRNA upstream 22368 40647788 ~ 40657653 (-) False XLOC_033057
TCONS_00064242 mRNA upstream 22375 40647795 ~ 40651944 (-) False XLOC_033057
TCONS_00064248 mRNA upstream 63937 40689357 ~ 40697585 (-) True XLOC_033063
TCONS_00064249 mRNA upstream 81742 40707162 ~ 40713183 (-) False XLOC_033064
TCONS_00064250 mRNA upstream 81742 40707162 ~ 40713204 (-) False XLOC_033064
TCONS_00064235 other downstream 52034 40572546 ~ 40573270 (-) False XLOC_033053
TCONS_00064217 other downstream 442784 40174216 ~ 40182520 (-) True XLOC_033043
TCONS_00064216 other downstream 462562 40093237 ~ 40162742 (-) False XLOC_033042
TCONS_00064176 other downstream 1099799 39524924 ~ 39525505 (-) True XLOC_033025
TCONS_00064162 other downstream 1406714 39213261 ~ 39218590 (-) False XLOC_033019
TCONS_00064243 other upstream 27709 40653129 ~ 40653238 (-) True XLOC_033058
TCONS_00064244 other upstream 29309 40654729 ~ 40657672 (-) True XLOC_033057
TCONS_00064245 other upstream 30583 40656003 ~ 40656085 (-) True XLOC_033059
TCONS_00064246 other upstream 30784 40656204 ~ 40656288 (-) True XLOC_033060
TCONS_00064247 other upstream 41927 40667347 ~ 40667463 (-) True XLOC_033062