XLOC_033184 (blcap)


Basic Information

Item Value
gene id XLOC_033184
gene name blcap
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 51769760 ~ 51771634 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064469
GGGTCCTTGGAGTGGCACAAATCTACGCAATCACCCAAAGAGCTGAACTCAATGGCGAAGGCTTAAATGCGAGATCAGGATTGAATTTGAAGAATGGCAGGCCTGGTCTCGTATTTGGATAGCACGTCTAATCCCTCACAGACACACAAGGGATTTGTGTTGTAGTAGCGTCACATCGGATATATCTGAGCTCATACAAAGCGTCCCGCTTTCGCAGAGACCATGTACTGCCTCCAGTGGCTCCTCCCGGTCCTCTTGATCCCCAAACCCTTAAATCCGGCCCTGTGGTTCAACCACTCCATGTTCATGGGCTTCTACCTGCTCAGCTTCCTGTTGGAGAGGAAGCCGTGCACCATTTGTGCCTTAGTCTTCCTGGCGGCGCTGTTTCTCATCTGCTACAGCTGCTGGGGAAACTGCTTTCTGTATCACTGCCACGATTCTCCACTGCCGGACTCAGCACACGACCCCAGCATTGTGGGCACCTAGACTTATTTTGTttccccccccacacacacacataccctggATGGTGAGGCGCCAGGAATGCTGGGACGTTTCAGTAGTTTCTACCCACTTTGATGCTGTAAGCGCCGCCTTTGATCCCTGACTTGAATCTCCTTTAGCGCGGCGGTGCAGGAGGGCGTCTGAAGCTTGCATGGGTTCCATTCTCGTTGTGTTCGGTACACATTCTTTCATTTCTGGATGCTGAATTTTTCCAAAGGggtcgatgatgatgatgatgatgatgatgtgtgtgcGAGAGTGTGTGTAAACGTTTGTATATTGCGATTTTTGGGTTTCTGTTCACGTGTCAATAATCAGTATGAGTCTCCTAAGTGTTACGCGGATGAATTTGGTCGCAGGTTGAGCTGAAGGTGTGTGTGCTACACTGCTGAGATCGCTCAAATGCTGTCAACACTTTTAATTCAATAAAGTTTCTAATGATCAGAGTCGA

Function

symbol description
blcap Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in myotome. Orthologous to human BLCAP (BLCAP apoptosis inducing factor).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-000330-7 Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in myotome. Orthologous to human BLCAP (BLCAP apoptosis inducing factor).

Ensembl:

ensembl_id ENSDARG00000052073

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064469 True 955 mRNA 0.49 2 51769760 51771634

Neighbor

gene id symbol gene type direction distance location
XLOC_033183 chd6 coding downstream 103021 51575924 ~ 51666739 (-)
XLOC_033182 rbl1 coding downstream 195785 51549203 ~ 51573975 (-)
XLOC_033181 NA coding downstream 228272 51528763 ~ 51541488 (-)
XLOC_033180 ptprt coding downstream 383064 51009981 ~ 51386696 (-)
XLOC_033179 BX530017.1 coding downstream 1013312 50754501 ~ 50756448 (-)
XLOC_033185 psmf1 coding upstream 24662 51796296 ~ 51811095 (-)
XLOC_033186 NA coding upstream 254857 52026491 ~ 52034656 (-)
XLOC_033187 rims4 coding upstream 310118 52081752 ~ 52156427 (-)
XLOC_033188 tomm34 coding upstream 455048 52226682 ~ 52235118 (-)
XLOC_033189 eif6 coding upstream 567914 52339548 ~ 52348651 (-)
XLOC_033178 BX530017.2 non-coding downstream 1022215 50742315 ~ 50747545 (-)
XLOC_033174 NA non-coding downstream 1264322 50457968 ~ 50505438 (-)
XLOC_033172 NA non-coding downstream 1389548 50359657 ~ 50380212 (-)
XLOC_033198 BX649282.5 non-coding upstream 1151739 52923373 ~ 52923489 (-)
XLOC_033199 BX649282.4 non-coding upstream 1261362 53032996 ~ 53033111 (-)
XLOC_033203 NA non-coding upstream 1480923 53252557 ~ 53258068 (-)
XLOC_033212 NA non-coding upstream 2393298 54164932 ~ 54174073 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G495398 NA non-coding CI01000340 null 15419793 ~ 15419989 (-)
bowfin (Amia calva) AMCG00007938 blcap,bc10 coding CM030123.1 CM030123.1 37495198 ~ 37496202 (+)