Gene
RNA
| Item | Value |
|---|---|
| gene id | G1422004 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 13546010 ~ 13547853 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tc1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1627582 | True | 455 | lncRNA | 0.50 | 2 | 13546010 | 13547853 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tmc6b | LOC106593098 | coding | downstream | 44799 | 13459621 ~ 13501211 (-) |
| LOC118940038 | NA | coding | downstream | 85287 | 13460182 ~ 13460723 (-) |
| LOC110493418 | LOC106564347 | coding | downstream | 165612 | 13378175 ~ 13380398 (-) |
| LOC110493417 | LOC106564349 | coding | downstream | 175301 | 13346096 ~ 13370709 (-) |
| LOC110485496 | LOC106592261 | coding | downstream | 206305 | 13303807 ~ 13339705 (-) |
| LOC118940028 | kith | coding | upstream | 24358 | 13572211 ~ 13576259 (-) |
| LOC110493422 | LOC106564358 | coding | upstream | 59494 | 13607347 ~ 13627739 (-) |
| LOC110485508 | LOC106564355 | coding | upstream | 80301 | 13628154 ~ 13644563 (-) |
| tekt4 | LOC106564280 | coding | upstream | 190209 | 13738062 ~ 13747411 (-) |
| LOC110493414 | NA | coding | upstream | 207672 | 13755525 ~ 13759636 (-) |
| G1422002 | NA | non-coding | downstream | 4585 | 13540197 ~ 13541425 (-) |
| G1421959 | NA | non-coding | downstream | 7328 | 13538039 ~ 13538682 (-) |
| G1421997 | NA | non-coding | downstream | 27907 | 13517385 ~ 13518103 (-) |
| G1421995 | NA | non-coding | downstream | 30262 | 13514989 ~ 13515748 (-) |
| G1421993 | NA | non-coding | downstream | 36219 | 13508194 ~ 13509791 (-) |
| G1422011 | NA | non-coding | upstream | 40235 | 13588088 ~ 13593967 (-) |
| G1422022 | NA | non-coding | upstream | 91654 | 13639507 ~ 13639734 (-) |
| G1422023 | NA | non-coding | upstream | 104046 | 13651899 ~ 13652567 (-) |
| G1422029 | NA | non-coding | upstream | 104719 | 13652572 ~ 13653744 (-) |
| G1422030 | NA | non-coding | upstream | 106991 | 13654844 ~ 13655050 (-) |
| LOC110485492 | LOC106592221 | other | downstream | 245592 | 13286956 ~ 13300529 (-) |
| LOC110485494 | LOC106591833 | other | downstream | 260507 | 13280562 ~ 13286294 (-) |
| pcyt2 | pcy2 | other | downstream | 291184 | 13222056 ~ 13254849 (-) |
| G1421744 | NA | other | downstream | 699853 | 12845797 ~ 12846157 (-) |
| G1422007 | NA | other | upstream | 33087 | 13580940 ~ 13581565 (-) |
| LOC118940035 | NA | other | upstream | 224286 | 13772139 ~ 13781710 (-) |
| G1422125 | LOC106595916 | other | upstream | 309023 | 13856876 ~ 13858250 (-) |
| LOC118940029 | exosc1 | other | upstream | 318567 | 13863439 ~ 13868827 (-) |
