G1422011


Basic Information

Item Value
gene id G1422011
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 13588088 ~ 13593967 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1627592
catagggcggtgcaccattggcccagcgtcgtccgggtttggccggagtaggccgtctttgtaaataagaatttattcttaactgacttgcctagttaaataaaaggtttaaaaataaaaatatgtcaaCAGGTTAGCTGTGTAGGTAAGGAGAGTAGGATGCATCATCATGAGGTTATCAGCCAGTCTGAGGATTATACTGAGGTAGCCGACCACAAGAGACTAACACAGGAGAGACCAATCAAAACCATGTGCCTCTCTAACAAAAGACCTTCTACGCAGCAGTCCTGGAGGAAGTGGCAGCTTAGAGAGAACATGGCTCAAAGGATCTTCTACGCAGCAGTCCTGGAGGAAGtggcagcttagagggaacatggCTCAAAAGACCTTCTACGCAGCAGTCCTGGAGGAAGtggcagcttagagggaacatggCTCAAAAGACCTTCTACGCAGCAGTCCTGGAGGAAGTGGCAGCTTAGAGAGAACATGGCTCAAAGGATCTTCTACGCAGCAGTCCTGGAGGAAGtggcagcttagagggaacatggCTCAAAAGACCTTCTACGCAGCAGTCCTGGAGGAAGtggcagcttagagggaacatggCTCAAAAGACCTTCTACGCAGCAGTCCTGGAGGAAGtggcagcttagagggaacatggCTCAAAGGATCTTCTACGCAGCAGTCCTGGAGGAAGtggcagcttagagggaacatggCTCAAAAGACCTTCTACGCAGCAGTCCTGGAGGAAGtggcagcttagagggaacatggCTCAAAAGACCTTCTACGCAGCAGTCCTGGAGGAAGtggcagcttagagggaacatggCTCAAAAGACCTTCTACGCAGCAGTCCTGGAGGAAGtggcagcttagagggaacatggCTCTTGAACGTTTACAATTAGAAAGTATGTAGAGATTATATTGGACCTAAAAGTGATAACTTCCCTTTTTCTGGCCCACAAATTGCTTTTGACGAACAAATCGGTCCGGGAAAAAAATCTGTGCGGCCATCCTCGGAATTGAGAAAATCCCGATGCGGCCTTTGAGCCAAAATGATGCCCACCTATCAATAAGACATAAAGCAGGGTCTGGAGTATTTCCTGGAGTATTTCCTGGTCATGACTCGAACCAGGAAGAACTCCAGGCGATAGCTTTTGTAACGGAGCAGGGTGAAGATGCCCCTAtacgctgatcttgggtcagttttgcattttttCCCACTAATAGTTCAAGTTAAGAGGAATCAAAAACTGATCCAAGAACTGTAACTAAGGGAATCTTCACCCCGGAGGTTTTGTAACACAAAACATAATACCTGTTACCTAACCACCTTGTTTAGCCAATAGCCATCAGTCCATAATACCTGGTGATTGGTGCCTCTAGATGTGGTTCAGAACAGAGGTGTTTGTGGTTGATATGTAAATGAATGATTGGCCAGTGTCCCTGTATCTCTTCAATGATTGGCTGGTGTCCCTGTATCTCTTCATTGATTGGCCGGTGTCCCTGTATCTCTTTAGCTCTTCCCCATCATCTTTAACAGCA
>TU1627593
catagggcggtgcaccattggcccagcgtcgtccgggtttggccggagtaggccgtctttgtaaataagaatttattcttaactgacttgcctagttaaataaaaggtttaaaaataaaaatatgtcaaCAGGTTAGCTGTGTAGGTAAGGAGAGTAGGATGCATCATCATGAGGTTATCAGCCAGTCTGAGGATTATACTGAGGTAGCCGACCACAAGAGACTAACACAGGAGAGACCAATCAAAACCATGTGCCTCTCTAACAAAAGACCTTCTACGCAGCAGTCCTGGAGGAAGTGGCAGCTTAGAGAGAACATGGCTCAAAGGATCTTCTACGCAGCAGTCCTGGAGGAAGtggcagcttagagggaacatggCTCAAAAGACCTTCTACGCAGCAGTCCTGGAGGAAGtggcagcttagagggaacatggCTCAAAAGACCTTCTACGCAGCAGTCCTGGAGGAAGTGGCAGCTTAGAGAGAACATGGCTCAAAGGATCTTCTACGCAGCAGTCCTGGAGGAAGtggcagcttagagggaacatggCTCAAAAGACCTTCTACGCAGCAGTCCTGGAGGAAGtggcagcttagagggaacatggCTCAAAAGACCTTCTACGCAGCAGTCCTGGAGGAAGtggcagcttagagggaacatggCTCAAAGGATCTTCTACGCAGCAGTCCTGGAGGAAGtggcagcttagagggaacatggCTCAAAAGACCTTCTACGCAGCAGTCCTGGAGGAAGtggcagcttagagggaacatggCTCAAAAGACCTTCTACGCAGCAGTCCTGGAGGAAGtggcagcttagagggaacatggCTCAAAAGACCTTCTACGCAGCAGTCCTGGAGGAAGtggcagcttagagggaacatggCTCTTGAACGTTTACAATTAGAAAGTATGTAGAGATTATATTGGACCTAAAAGTGATAACTTCCCTTTTTCTGGCCCACAAATTGCTTTTGACGAACAAATCGGTCCGGGAAAAAAATCTGTGCGGCCATCCTCGGAATTGAGAAAATCCCGATGCGGCCTTTGAGCCAAAATGATGCCCACCTATCAATAAGACATAAAGCAGGGTCTGGAGTATTTCCTGGAGTATTTCCTGGTCATGACTCGAACCAGGAAGAACTCCAGGCGATAGCTTTTGTAACGGAGCAGGGTGAAGATGCCCCTAtacgctgatcttgggtcagttttgcattttttCCCACTAATAGTTCAAGTTAAGAGGAATCAAAAACTGATCCAAGAACTGTAACTAAGGGAATCTTCACCCCGGAGGTTTTGTAACACAAAACATAATACCTGTTACCTAACCACCTTGTTTAGCCAATAGCCATCAGTCCATAATACCTGGTGATTGGTGCCTCTAGATGTGGTTCAGAACAGAGGTGTTTGTGGTTGATATGTAAATGAATGATTGGCCAGTGTCCCTGTATCTCTTCAATGATTGGCTGGTGTCCCTGTATCTCTTCATTGATTGGCCGGTGTCCCTGTATCTCTTTAGCTCTTCCCCATCATCTTTAACAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1627592 False 1560 lncRNA 0.47 2 13588088 13593967
TU1627593 True 1560 lncRNA 0.47 2 13588088 13593967

Neighbor

gene id symbol gene type direction distance location
LOC118940028 kith coding downstream 11829 13572211 ~ 13576259 (-)
tmc6b LOC106593098 coding downstream 86877 13459621 ~ 13501211 (-)
LOC118940038 NA coding downstream 127365 13460182 ~ 13460723 (-)
LOC110493418 LOC106564347 coding downstream 207690 13378175 ~ 13380398 (-)
LOC110493417 LOC106564349 coding downstream 217379 13346096 ~ 13370709 (-)
LOC110493422 LOC106564358 coding upstream 13380 13607347 ~ 13627739 (-)
LOC110485508 LOC106564355 coding upstream 34187 13628154 ~ 13644563 (-)
tekt4 LOC106564280 coding upstream 144095 13738062 ~ 13747411 (-)
LOC110493414 NA coding upstream 161558 13755525 ~ 13759636 (-)
LOC118940086 NA coding upstream 165843 13759810 ~ 13761827 (-)
G1422004 NA non-coding downstream 40235 13546010 ~ 13547853 (-)
G1422003 NA non-coding downstream 40524 13545255 ~ 13547564 (-)
G1422002 NA non-coding downstream 46663 13540197 ~ 13541425 (-)
G1421959 NA non-coding downstream 49406 13538039 ~ 13538682 (-)
G1421997 NA non-coding downstream 69985 13517385 ~ 13518103 (-)
G1422022 NA non-coding upstream 45540 13639507 ~ 13639734 (-)
G1422023 NA non-coding upstream 57932 13651899 ~ 13652567 (-)
G1422029 NA non-coding upstream 58605 13652572 ~ 13653744 (-)
G1422030 NA non-coding upstream 60877 13654844 ~ 13655050 (-)
G1421965 NA non-coding upstream 71885 13665852 ~ 13666527 (-)
G1422007 NA other downstream 6523 13580940 ~ 13581565 (-)
LOC110485496 LOC106592261 other downstream 248509 13303807 ~ 13339705 (-)
LOC110485492 LOC106592221 other downstream 287670 13286956 ~ 13300529 (-)
LOC110485494 LOC106591833 other downstream 302585 13280562 ~ 13286294 (-)
pcyt2 pcy2 other downstream 333262 13222056 ~ 13254849 (-)
LOC118940035 NA other upstream 178172 13772139 ~ 13781710 (-)
G1422125 LOC106595916 other upstream 262909 13856876 ~ 13858250 (-)
LOC118940029 exosc1 other upstream 272453 13863439 ~ 13868827 (-)
LOC110485459 LOC106564320 other upstream 368740 13959793 ~ 13997078 (-)

Expression


Co-expression Network