G1422103


Basic Information

Item Value
gene id G1422103
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 13816560 ~ 13818214 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1627704
CCTTGTTATTCATCAATCAAAAAAGCAAACAACCAATCAATAAACTTGACCGTTATTTATTACAATACTTTCTGTTTAAATCCATTTAATTAAAAAACGTCATTACAATCagtagcacagccacaaagtcatcaaatataaccacactgctaaccctaattaATGCCTCACCTTAAGCACATTTTTGGTTTCATTCATTTTTACGAATACCCTGTCACACATTCCGATTGACAtagaggaagCTGTCCTGCTGTggtcatttcagagagacagtagaggaagCTGTCCTGCTGTagtcatttcagagagacagtagaggaagCTGTCCTGCTGCggtcatttcagagagacagtagaggaagCTGTCCTGCTGCggtcatttcagagagacagtagaggaagCTGTCCTGCTGCAGCCAtttcagagagacagtagaggaagCTGTCCTGCTGCAGCCAtttcagagagacagtagaggaagCTGCCCTGCTGCAGCCAtttgagagagacagtagaggaagCTGTCCTGCTGCAGCCAtttcagagagacagtagaggaagCTGCCCTGCTGCAGCCAtttcagagagacagtagaggaagCTGCCCTGCTGCAGCCatttcagagagacagtagaggaagCTGTCCTGCTGTggtcatttcagagagacagtagaggaagCTGCCCTGCTGTggtcatttcagagagacagtagaggaagCTGTCCTGCTGTAGTTATTTCAGAGAGACAGTAGACTATTGTCTTTCTGATGTGGATTACGCACTGAACTGTCAGTAGGCTGTGGCTAGGTCTGTTcatatatacagtaggtttgcagATATGGATCACTTTGTGGCAGGTGTCTCATCTTGGTCTGTTCACATGAGTTTGTGGATGTGGATCACTCTCTTGCAGTTGGGGCAGCGGTGTTCTACGTCCTGACAGGAGTCAACACAGAACGGAATCAAACAGCATGGCCagcacctagagagagagagtgatgggggagagagacagagagagagagagagccggagagagagagccagagagagagatggggggaaagagagagagagagagagagagagagatgggggagagagagagagagagagagagagagagaggg

Function

NR:

description
PREDICTED: lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1627704 True 1134 lncRNA 0.47 3 13816560 13818214

Neighbor

gene id symbol gene type direction distance location
LOC118940037 NA coding downstream 17196 13789899 ~ 13799364 (-)
LOC118940087 NA coding downstream 32659 13749974 ~ 13801809 (-)
LOC118940035 NA coding downstream 34850 13772139 ~ 13781710 (-)
LOC118940086 NA coding downstream 54733 13759810 ~ 13761827 (-)
LOC110493414 NA coding downstream 56924 13755525 ~ 13759636 (-)
LOC118940029 exosc1 coding upstream 45225 13863439 ~ 13868827 (-)
LOC118940026 LOC106564313 coding upstream 51059 13869273 ~ 13872206 (-)
LOC110485450 LOC106564311 coding upstream 54234 13872448 ~ 13879257 (-)
LOC110485453 NA coding upstream 79638 13897852 ~ 13901992 (-)
LOC118940563 NA coding upstream 97930 13916144 ~ 13916250 (-)
G1422064 NA non-coding downstream 98207 13716446 ~ 13718353 (-)
G1422057 NA non-coding downstream 112368 13703267 ~ 13704192 (-)
G1422055 NA non-coding downstream 117448 13698302 ~ 13699112 (-)
G1422125 LOC106595916 non-coding upstream 38662 13856876 ~ 13858250 (-)
G1422112 NA non-coding upstream 42948 13861162 ~ 13861493 (-)
G1422108 NA non-coding upstream 43979 13862193 ~ 13862601 (-)
G1422127 NA non-coding upstream 46924 13865138 ~ 13865512 (-)
G1422119 NA non-coding upstream 55976 13874190 ~ 13875983 (-)
LOC110485508 LOC106564355 other downstream 181559 13628154 ~ 13644563 (-)
G1422007 NA other downstream 234995 13580940 ~ 13581565 (-)
LOC110485496 LOC106592261 other downstream 476981 13303807 ~ 13339705 (-)
LOC110485492 LOC106592221 other downstream 516142 13286956 ~ 13300529 (-)
LOC110485459 LOC106564320 other upstream 144493 13959793 ~ 13997078 (-)
LOC110485493 LOC106592221 other upstream 457699 14275862 ~ 14289159 (-)
LOC110485498 LOC106592261 other upstream 476804 14293700 ~ 14343967 (-)

Expression


Co-expression Network