LOC110485453


Basic Information

Item Value
gene id LOC110485453
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 13897852 ~ 13901992 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021556525.2
agagagaatgagatagtgagagagagagttcattGTGAGGGCTCAAGCGCACACTACACAGAAAAACTTTGTTTGCTTCTCGTCTTTGACAGCAGAAGAAGGCTACTATAAAGTAGCGGAGAATGTCAATTTCCATATGGAATTCCATATCTGCGCAGTAGGCTACATCTCCTCAAAGCCTGAGCAGGTGTCAGATTTTACTGCGTTCACTTGCTGAAGGGGTGCTGACGGAGTTGTCTTGGAATCCCTCTATTCTTTCAATCCGTCTCTCATCAACCTGATCTCCCTACTACTacctcatccccccctctctcctcacccctccatctcccctctctgagGGTTATGGAGGACCCGGAACCCCCCTCTGTGGTGGATGGTCCGTCCCTGCTCTGGCAGCCTGAAAAGAGGCGAAGCAGGAAGTCGGGATGTTCCAACATCTTCGCGGGGGTAAATCTGCGTCAGCTAAGACGGCTGTTCCATGTGGCCGGGGACCGGGACGCAGAGCAGCGGGCAAGACTGGTGTGGGGCAGagaagagcgagacagagggggagaggaagaggaggaggaggagggagagatggatgcaGGGCTGGCCCAGGCGTTGGTGGGGTTCAGGGTGAGAGCCAGAAGCAGGAGTGGTATCAGGACGGAGGGACACAGAGAACCCAAGTTGCTGAAAGCATTTGGACACCtcaggaTTAAGGAGGGTTTGGACCACCCTGAGGAGGACAATGAAGAGGAGGACCCCAGTGATATTGGAGAGCTGGACCCCCTCCCTGGAGGGTCGACAGGTGCAGAGGGGGGCGCCCCGTTGACGGACGCACAGAAGCCCTCAGAGAGACCCCATCTGGAGAGGCTGGGGGCCGTGACGAGGCAGGAAGGAACCAGGGACCCAGAACGCTACCTCCATCGCATTCTACACTGAGCCAACGGAGAGAAATGAGCGCTGGCCTGCTGAACTTAAAACGTGTCGTAAAGCTGCTCTGTGATTGGGCCTTTTTCCGTTCACACCAATCAGAGCGAGGTGTCGTTCAATAACTCCATGTGTGGAGTTAAATGAAGTACGTTTTCGACCACACTGTCAACCTAACCTTACTTGTCGAGATGTTGTCACTTTAACCAAAGGAAGGGAGAGAACTGGCAACATCACAATGACTGTGAGAGCATTATCAATCCTGCTCAGTCACTGTTCACTGACTGATCAGAGCAGACAGACCGATCTACAACACTATCGGCAGGTGACTATGGCTGTGTTCGAGAGCCTCAAAACGACTGCAGGCGACTGTCGAATCCCCTGGCATCAAATTActcattatttgtagatcagtcggTCAGTTACAATTTGCCCATGATACATTGCGGTTTTGATCCTCTCGAACACGGCCTGTGTGTGGTCCAAAAATCCCAAAAGCCAGTAACACTAGAAATGGGATCTCTCTATAACAAAGCTATACCTGGTAGATAGCCTACAACTAAACCTGAAAGGACTCGGAAAGGTGTAAACAACATGGGAAGACATTTACACAGCATTAACTGTGATGTAAAACACAGGACCGTTATCACTCTGTACTGAAAGTGGtccaacagtggactaatgaataAAACTAAGATTTAGTTTGAGTGAACTATCCATTTAAGGGTTACGGTTGACACATAAACATGCAAATCTGTCAAAGTAAACTTGCATAGATGTATTTGTGTGCATAGTTTTGTCTAAGAAGTAGATGAATGTCCTCACCAAATAAAGTGAGGAGGAAAATAAGAATAAAGTATTCTCtctaaataaaaacacatttatcaAAACAAACGACAAGATACATGGTATTAATGTAATACAGTTTTGTTATAATCTTTCATTAAATATATTACATACAAATTATACAGTGCAAATGTCACAATACATTTCAGGTCAGTTAGAATCTGTGGCAACAGCAGGAAGTCCTGATAGTGTGTTTTCAAAAAAACGTGTCCATCTTTCTCCCACAAGAATgaaaaattattaaaaaaattaCCAGAAATCAAAGTAAACAGAAGCGATGGGAGACatcttaaatgtatttgactacagAATGGCGGAGAGGAAAACCTGATCTAAAGTAGTAGTTTCTCCAAATGTGGCCCCCTAAAACTTCAACGCGCTGCAGTACCTTGCAGTTC

Function

NR:

description
uncharacterized protein LOC110485452

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021556525.2 True 2162 mRNA 0.47 3 13897852 13901992

Neighbor

gene id symbol gene type direction distance location
LOC110485450 LOC106564311 coding downstream 18595 13872448 ~ 13879257 (-)
LOC118940026 LOC106564313 coding downstream 25646 13869273 ~ 13872206 (-)
LOC118940029 exosc1 coding downstream 29025 13863439 ~ 13868827 (-)
LOC118940037 NA coding downstream 98488 13789899 ~ 13799364 (-)
LOC118940087 NA coding downstream 113951 13749974 ~ 13801809 (-)
LOC118940563 NA coding upstream 14152 13916144 ~ 13916250 (-)
LOC118940564 NA coding upstream 17401 13919393 ~ 13919499 (-)
LOC118940565 NA coding upstream 20421 13922413 ~ 13922519 (-)
LOC118940567 NA coding upstream 23499 13925491 ~ 13925597 (-)
LOC118940568 NA coding upstream 26575 13928567 ~ 13928673 (-)
G1422120 NA non-coding downstream 3385 13893140 ~ 13894467 (-)
G1422119 NA non-coding downstream 21869 13874190 ~ 13875983 (-)
G1422127 NA non-coding downstream 32340 13865138 ~ 13865512 (-)
G1422108 NA non-coding downstream 35251 13862193 ~ 13862601 (-)
G1422112 NA non-coding downstream 36359 13861162 ~ 13861493 (-)
G1422131 NA non-coding upstream 739 13902731 ~ 13903134 (-)
G1422133 NA non-coding upstream 4159 13906151 ~ 13906636 (-)
G1422139 NA non-coding upstream 15055 13917047 ~ 13917322 (-)
G1422140 NA non-coding upstream 31218 13933210 ~ 13933527 (-)
G1422141 NA non-coding upstream 33082 13935074 ~ 13935751 (-)
G1422125 LOC106595916 other downstream 39602 13856876 ~ 13858250 (-)
LOC118940035 NA other downstream 116812 13772139 ~ 13781710 (-)
LOC110485508 LOC106564355 other downstream 262851 13628154 ~ 13644563 (-)
G1422007 NA other downstream 316287 13580940 ~ 13581565 (-)
LOC110485459 LOC106564320 other upstream 60715 13959793 ~ 13997078 (-)
LOC110485493 LOC106592221 other upstream 373921 14275862 ~ 14289159 (-)
LOC110485498 LOC106592261 other upstream 393026 14293700 ~ 14343967 (-)
G1422757 NA other upstream 689474 14591466 ~ 14592594 (-)
G1422796 NA other upstream 863539 14765531 ~ 14768638 (-)

Expression


Co-expression Network