Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118940564 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 13919393 ~ 13919499 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005037152.1 | True | 107 | mRNA | 0.46 | 1 | 13919393 | 13919499 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940563 | NA | coding | downstream | 3143 | 13916144 ~ 13916250 (-) |
| LOC110485453 | NA | coding | downstream | 17401 | 13897852 ~ 13901992 (-) |
| LOC110485450 | LOC106564311 | coding | downstream | 40136 | 13872448 ~ 13879257 (-) |
| LOC118940026 | LOC106564313 | coding | downstream | 47187 | 13869273 ~ 13872206 (-) |
| LOC118940029 | exosc1 | coding | downstream | 50566 | 13863439 ~ 13868827 (-) |
| LOC118940565 | NA | coding | upstream | 2914 | 13922413 ~ 13922519 (-) |
| LOC118940567 | NA | coding | upstream | 5992 | 13925491 ~ 13925597 (-) |
| LOC118940568 | NA | coding | upstream | 9068 | 13928567 ~ 13928673 (-) |
| LOC110485459 | LOC106564320 | coding | upstream | 40294 | 13959793 ~ 13997078 (-) |
| LOC100136331 | LOC106591788 | coding | upstream | 105456 | 14024955 ~ 14037283 (-) |
| G1422139 | NA | non-coding | downstream | 2071 | 13917047 ~ 13917322 (-) |
| G1422133 | NA | non-coding | downstream | 12757 | 13906151 ~ 13906636 (-) |
| G1422131 | NA | non-coding | downstream | 16259 | 13902731 ~ 13903134 (-) |
| G1422120 | NA | non-coding | downstream | 24926 | 13893140 ~ 13894467 (-) |
| G1422119 | NA | non-coding | downstream | 43410 | 13874190 ~ 13875983 (-) |
| G1422140 | NA | non-coding | upstream | 13711 | 13933210 ~ 13933527 (-) |
| G1422141 | NA | non-coding | upstream | 15575 | 13935074 ~ 13935751 (-) |
| G1422152 | NA | non-coding | upstream | 35521 | 13955020 ~ 13959127 (-) |
| G1422161 | NA | non-coding | upstream | 60948 | 13980447 ~ 13992216 (-) |
| G1422125 | LOC106595916 | other | downstream | 61143 | 13856876 ~ 13858250 (-) |
| LOC118940035 | NA | other | downstream | 138353 | 13772139 ~ 13781710 (-) |
| LOC110485508 | LOC106564355 | other | downstream | 284392 | 13628154 ~ 13644563 (-) |
| G1422007 | NA | other | downstream | 337828 | 13580940 ~ 13581565 (-) |
| LOC110485493 | LOC106592221 | other | upstream | 356414 | 14275862 ~ 14289159 (-) |
| LOC110485498 | LOC106592261 | other | upstream | 375519 | 14293700 ~ 14343967 (-) |
| G1422757 | NA | other | upstream | 671967 | 14591466 ~ 14592594 (-) |
| G1422796 | NA | other | upstream | 846032 | 14765531 ~ 14768638 (-) |
