G1422120


Basic Information

Item Value
gene id G1422120
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 13893140 ~ 13894467 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1627730
ctcctcaccttaaacagttcgtacaggtcttcctccctccctccccctcctcaccttaaacagttcgtacaggtcttcctccctcctcctcctcaccttaaacagttcgtacaggtcttcctccctcctcctcctcctcttaaacagttcgtacaggtcttcctccctcctcctcatcctcaccttaaacagttcgtacaggtcttcctccctcctcctcctcctcaccttaaacagttcgtacaggtcttcctccctcctccccctcctcaccttaaacagttcgtacaggtcttcctccctcctcctcctcaccttaaacagttcgtacaggtcttcctccctcctcctcctcaccttaaacagttcgtacaggtcttcctccctcctccccctcctcaccttaaacagttcgtacaggtcttcctccctccctcctcctcctcaccttaaacagttcgtacaggtcttcctccctcctcctcctcaacttaaacagttcgtacaggtcttcctccctcctcctcttaaacagttcgtacaggtcttcctccctcctcctcttaaacagttcgtacaggtcttcctcctcctcaccttaaacagttcgtacaggtcttcctccctcctcctcctcaccttaaacagttcgtacaggtcttcctccctcctcctcctcaccttaaacagttcgtacaggtcttcctccctcctcctcctcaccttaaacagttcgtacaggtcttcctccctccctcctcctcctcctcaccttaaacagttcgtacaggtcttcctcctcctcaccttaaacagttcgtacaggtcttcctcctcctcaccttaaacagttcgtacaggtcttcctcctcctcaccttaaacagttcgtacaggtcttcctccctcctcctcctcaccttaaacagttcgtacaggtcttcctcctcctcaccttaaacagttcgtacaggtcttcctccctcctcctcctcaccttaaacagttcgtacaggtcttcctccctcctcctcctcctcaccttaaacagttcatacaggtcttcctccctccctcctcctcctcaccttaaacagttcgtacaggtcttcctcctcctcaccttaaacagttcgtacaggtcttcctccctccctcctcctcctcaccttaaacagttcgtacaggtcttcctccctcctcctcctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1627730 True 1208 lncRNA 0.52 2 13893140 13894467

Neighbor

gene id symbol gene type direction distance location
LOC110485450 LOC106564311 coding downstream 13883 13872448 ~ 13879257 (-)
LOC118940026 LOC106564313 coding downstream 20934 13869273 ~ 13872206 (-)
LOC118940029 exosc1 coding downstream 24313 13863439 ~ 13868827 (-)
LOC118940037 NA coding downstream 93776 13789899 ~ 13799364 (-)
LOC118940087 NA coding downstream 109239 13749974 ~ 13801809 (-)
LOC110485453 NA coding upstream 3385 13897852 ~ 13901992 (-)
LOC118940563 NA coding upstream 21677 13916144 ~ 13916250 (-)
LOC118940564 NA coding upstream 24926 13919393 ~ 13919499 (-)
LOC118940565 NA coding upstream 27946 13922413 ~ 13922519 (-)
LOC118940567 NA coding upstream 31024 13925491 ~ 13925597 (-)
G1422119 NA non-coding downstream 17157 13874190 ~ 13875983 (-)
G1422127 NA non-coding downstream 27628 13865138 ~ 13865512 (-)
G1422108 NA non-coding downstream 30539 13862193 ~ 13862601 (-)
G1422112 NA non-coding downstream 31647 13861162 ~ 13861493 (-)
G1422125 LOC106595916 non-coding downstream 34890 13856876 ~ 13858250 (-)
G1422131 NA non-coding upstream 8264 13902731 ~ 13903134 (-)
G1422133 NA non-coding upstream 11684 13906151 ~ 13906636 (-)
G1422139 NA non-coding upstream 22580 13917047 ~ 13917322 (-)
G1422140 NA non-coding upstream 38743 13933210 ~ 13933527 (-)
G1422141 NA non-coding upstream 40607 13935074 ~ 13935751 (-)
LOC118940035 NA other downstream 112100 13772139 ~ 13781710 (-)
LOC110485508 LOC106564355 other downstream 258139 13628154 ~ 13644563 (-)
G1422007 NA other downstream 311575 13580940 ~ 13581565 (-)
LOC110485459 LOC106564320 other upstream 68240 13959793 ~ 13997078 (-)
LOC110485493 LOC106592221 other upstream 381446 14275862 ~ 14289159 (-)
LOC110485498 LOC106592261 other upstream 400551 14293700 ~ 14343967 (-)
G1422757 NA other upstream 696999 14591466 ~ 14592594 (-)
G1422796 NA other upstream 871064 14765531 ~ 14768638 (-)

Expression


Co-expression Network