Gene
RNA
| Item | Value |
|---|---|
| gene id | G1423053 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 15471825 ~ 15472041 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb2 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1629022 | True | 217 | lncRNA | 0.42 | 1 | 15471825 | 15472041 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936458 | LOC106591490 | coding | downstream | 3569 | 15444480 ~ 15468256 (-) |
| LOC118940092 | LOC106564328 | coding | downstream | 33420 | 15288411 ~ 15438405 (-) |
| LOC118940327 | NA | coding | downstream | 96708 | 15373361 ~ 15375117 (-) |
| LOC118940323 | LOC106601626 | coding | downstream | 124540 | 15317751 ~ 15347285 (-) |
| LOC118940319 | LOC106564328 | coding | downstream | 234407 | 15132799 ~ 15237418 (-) |
| LOC118940331 | NA | coding | upstream | 142823 | 15614864 ~ 15626817 (-) |
| LOC110485613 | LOC106591333 | coding | upstream | 155507 | 15627128 ~ 15704265 (-) |
| LOC110487262 | hoga1 | coding | upstream | 272174 | 15744215 ~ 15760194 (-) |
| LOC110485609 | LOC106591329 | coding | upstream | 305646 | 15777687 ~ 15797879 (-) |
| LOC110487244 | LOC105012087 | coding | upstream | 378633 | 15850674 ~ 15871731 (-) |
| LOC110494998 | LOC106596103 | non-coding | downstream | 38166 | 14908527 ~ 15433659 (-) |
| G1423032 | NA | non-coding | downstream | 45523 | 15377339 ~ 15426302 (-) |
| G1423038 | LOC106591342 | non-coding | downstream | 73237 | 15398168 ~ 15398588 (-) |
| G1423002 | NA | non-coding | downstream | 77717 | 15260137 ~ 15394108 (-) |
| G1423025 | NA | non-coding | downstream | 115390 | 15354532 ~ 15356435 (-) |
| G1423060 | LOC105021375 | non-coding | upstream | 11101 | 15483142 ~ 15483477 (-) |
| G1423068 | NA | non-coding | upstream | 21808 | 15493849 ~ 15494288 (-) |
| G1423067 | NA | non-coding | upstream | 23019 | 15495060 ~ 15495865 (-) |
| G1423069 | NA | non-coding | upstream | 25640 | 15497681 ~ 15497991 (-) |
| G1423070 | NA | non-coding | upstream | 29091 | 15501132 ~ 15502500 (-) |
| G1422920 | LOC106591235 | other | downstream | 58228 | 15397290 ~ 15413597 (-) |
| G1422918 | NA | other | downstream | 66651 | 15383119 ~ 15405174 (-) |
| G1422891 | LOC106601621 | other | downstream | 118735 | 14907317 ~ 15353090 (-) |
| G1422897 | NA | other | downstream | 136934 | 15333878 ~ 15334891 (-) |
| LOC118940320 | LOC106605908 | other | downstream | 224483 | 15003526 ~ 15247342 (-) |
| G1423112 | NA | other | upstream | 111654 | 15583695 ~ 15584093 (-) |
| G1423836 | NA | other | upstream | 336645 | 15808686 ~ 15831010 (-) |
| G1423891 | NA | other | upstream | 513232 | 15985273 ~ 15986842 (-) |
| G1424040 | NA | other | upstream | 897716 | 16369757 ~ 16370443 (-) |
| G1424051 | cbx6 | other | upstream | 934690 | 16406731 ~ 16410128 (-) |
