XLOC_033863


Basic Information

Item Value
gene id XLOC_033863
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 34163775 ~ 34187355 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00068874
GAACAGCCAACAGAGTGTTGTAAAGACTGAGGGCTGAATGTCACGGATCGGCCAGCGCCAACACAGACCTTAAATGGTGATGATGCCACCGTCCTGTGCCATCTTGGCTTGTCGTTTGGGTTAGACAGAGATGCCCAGTCTAGAGTGGAGCCAGTCCGTCTGCCGGCCGACTGCCCTCCTGGAGACTCCAGAACATCTGATCCTcctgcagagagagagacagacagacagacagacagacagagcaaaGAGCACATTCACTCCCTGAATCTACAATCCTATCAGGAGCGAACTGGAAACTGAAGAAGCAGCGACCCCCACTAACAGGCCCAAATCTGTCATCTCTGCCTCCAACACCCCCCGCTCCTGCCTCAGCATTCCTCTCTCTCTTCTGTCCCGCGCGGGGCCTACTGGGGCCCCGTCTCCCCCTCCGAGGGCCAGCATTCAGCTCTCTGACCACTCAGTGCAGGCTCGCGACCCCCTGACCCCCCAGCCGCCAGCCTATCCAGTCTGATTAACTCAAACACAGACTGATGGCATTATTTTGCTTCACAGGCTCTATTGAGGGAGAAGATCTAAAGCCCTGGGCCTGTGCCCCCATTCTGCTCAGTCTCAACCCTCTCTGGCCCAAACAGACAGCAGAGGACACACTGTTAATGAAGCAGCTTTGCCTCAAGGAGGGGTGCGGAAATACACAATCATTATCTCCCATTCTCCACTCGCTGACTTGGTATGTGCTTACAAAAATGATGTTTGAGAAAAAGAATGAGGAGGGTAGCAAGAGGGAAATGGTGTTTTCTTTGAGATTTGcatatatttgttttctttccgGATTTAGAAAAGTGGAAACAATGcactaaataaatcaaaatggaAAAGGCAGCGAGAGGAATTTCATTTTTTCTTGGAGATTTGCATAAATTCCTTTCTTCTGGGATTTAGGAAAGGGGAAATAATGCACAAGATTAATCAAAGTCACCTGACAGACTCCAAACATTAAATCTGCCTTTCATATTGCCGCATTAGTGTTGACGTTTTCATATTTGACCTCGTTTAATCTCACGCTAAGGCTTGCACATCACTAAATTTGCTGCCTGGTTTAATTCTGTAAGCGACGCTATTGTGTTTCAGGAACTTTTTCCTCATATGCACAGTTGTTAGTGTCTGCGAAAGCATTCTTGGTGCTTGTGTGCCTAGCCTAAACCAACACCACAAAATGAGAGGGGGGGAGGAGAGGATGGAGTCTTGTCTGTCCCGCTGTGCCAAATATTAGATCTCCCTCCACATATTAGACCGTTCCACTGAGCCAGTGTGTGGTGGAGAAGCAGAGAGACGGGTGATAATGGAAGTGCCACGACGAGTAGTGCCAGAGAACTCCAGAAAACTTCCCGTATTTTCACGACTCAAGAACAGTAGCACAGTCTACATGTTCGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00068874 True 1434 lncRNA 0.49 3 34163775 34187355

Neighbor

gene id symbol gene type direction distance location
XLOC_033862 NA coding upstream 57565 34102306 ~ 34106210 (+)
XLOC_033861 CR927368.1 coding upstream 83477 34080184 ~ 34080298 (+)
XLOC_033860 NA coding upstream 208449 33949284 ~ 33955326 (+)
XLOC_033859 BX511006.1 coding upstream 310468 33853188 ~ 33853307 (+)
XLOC_033858 paqr5b coding upstream 688581 33457148 ~ 33475194 (+)
XLOC_033864 lctla coding downstream 39720 34227075 ~ 34236091 (+)
XLOC_033865 tipin coding downstream 48883 34236238 ~ 34245115 (+)
XLOC_033866 NA coding downstream 97212 34284567 ~ 34288459 (+)
XLOC_033867 fibinb coding downstream 102696 34290051 ~ 34293073 (+)
XLOC_033868 bbox1 coding downstream 109434 34296789 ~ 34315291 (+)
XLOC_033856 NA non-coding upstream 811189 33351182 ~ 33352586 (+)
XLOC_033869 NA non-coding downstream 229711 34417066 ~ 34417507 (+)
XLOC_033870 NA non-coding downstream 265762 34453117 ~ 34470294 (+)
XLOC_033880 NA non-coding downstream 636150 34823505 ~ 34828551 (+)
XLOC_033888 NA non-coding downstream 1161131 35348486 ~ 35351777 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G54475 NA non-coding NC_056705.1 CM032074.1 19821724 ~ 19822001 (+)