XLOC_033869


Basic Information

Item Value
gene id XLOC_033869
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 34417066 ~ 34417507 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00068580
GAAATACAACATTAAATACCCATGTTATTTTTTATGACAATATCATCCACTAATTTTCACTTGAGTTACATTGTGGGGCATAAGTGGCACGGTTAATAACGATCTGAGTTTTGATGAATGCATATTCAAACATTATTAAACCAGGCCTCCATTAATTagaagtgaataaaaaaaaaaacaaagtacagCATGTTAGCTTACAGACGGAAGTAACCAAACATTATAATGTAATGTTAAAGGAATAATTATGGTCTGCATTATGTCTTCAGAATGCTTCACGCAAGGCTATCTAGCTATCTATGCATCTCAGTAGTCGCTGTGAGTCAAGCAGCACACTGATTCATGCTACAGGAATATtctacccaaaactgaaaactacTAAGTTTACCAAGGCCATTCAAGATGTAGATGACTGTTTTTCCATAAGTAAAACACTGAATTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00068580 True 442 lncRNA 0.34 1 34417066 34417507

Neighbor

gene id symbol gene type direction distance location
XLOC_033868 bbox1 coding upstream 101775 34296789 ~ 34315291 (+)
XLOC_033867 fibinb coding upstream 123993 34290051 ~ 34293073 (+)
XLOC_033866 NA coding upstream 128607 34284567 ~ 34288459 (+)
XLOC_033865 tipin coding upstream 171951 34236238 ~ 34245115 (+)
XLOC_033864 lctla coding upstream 180975 34227075 ~ 34236091 (+)
XLOC_033870 NA coding downstream 35610 34453117 ~ 34470294 (+)
XLOC_033871 cln6a coding downstream 70326 34487833 ~ 34492609 (+)
XLOC_033872 calml4a coding downstream 75237 34492744 ~ 34496196 (+)
XLOC_033873 rfx7a coding downstream 89288 34506795 ~ 34546833 (+)
XLOC_033874 fhod1 coding downstream 131691 34549198 ~ 34618314 (+)
XLOC_033863 NA non-coding upstream 229711 34163775 ~ 34187355 (+)
XLOC_033862 NA non-coding upstream 310856 34102306 ~ 34106210 (+)
XLOC_033861 CR927368.1 non-coding upstream 336768 34080184 ~ 34080298 (+)
XLOC_033860 NA non-coding upstream 461740 33949284 ~ 33955326 (+)
XLOC_033880 NA non-coding downstream 405998 34823505 ~ 34828551 (+)
XLOC_033888 NA non-coding downstream 930979 35348486 ~ 35351777 (+)
XLOC_033889 NA non-coding downstream 1017739 35435246 ~ 35763213 (+)
XLOC_033890 NA non-coding downstream 1408898 35826405 ~ 35828249 (+)

Expression


Co-expression Network