XLOC_033872 (calml4a)


Basic Information

Item Value
gene id XLOC_033872
gene name calml4a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 34492744 ~ 34496196 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00066264
GTGGACTTTGGTTTCTCCAGGTAAGGGAGTGACTCTTCCCGAACAGCCCAAACGTACATAGACATGGCAAAATTCCTATCACAAAATCAGATTGATGAGTTCAAAGAATGTTTCTCGCTTTATGACAAGAAGCGAAAGGGGAAGATTGAGGCAAAAGACCTTATAACAGTCATGCGCTGTCTGGGTACAAGCCCCACATATAATGAAGTGGACCGACATCTGCAAGTCCACAAAATAGATAAGACAGGGGAGCTGGACTTTTCTACATTTCTAACCATGATGCACAGACAGATGCAGCAGGAGGATCCTAAGACTGAAATCCTGGAGGCCATGCGTATGACAGACAAACACAAGAAAGGCTACATTCAGGCCTCTGAGCTACGGGCTAAACTCACTGGCTTAGGGGAAAAGCTCACAGACAAAGAAGTGGATGAGCTTTTTAAAGAAGCACATGTTGGACGTGATGGACTTGTTCACTATGAGGAGTTCACTAGAATGGTCACACTTCCTACAGTGGACTACTAGTACTAATGAAGAACAATGAGTCGGGCCCTTATTctcaataatgcatttatttactgctgtgaatgagatattttttttaatcattgtatataaaaaataacaagagTTTAAACTCTACAATAAAAAGTCATATTTGGA
>TCONS_00066265
CGAACAGCCCAAACGTACATAGACATGGCAAAATTCCTATCACAAAATCAGATTGATGCGAAAGGGGAAGATTGAGGCAAAAGACCTTATAACAGTCATGCGCTGTCTGGGTACAAGCCCCACATATAATGAAGTGGACCGACATCTGCAAGTCCACAAAATAGATAAGACAGGGGAGCTGGACTTTTCTACATTTCTAACCATGATGCACAGACAGATGCAGCAGGAGGATCCTAAGACTGAAATCCTGGAGGCCATGCGTATGACAGACAAACACAAGAAAGGCTACATTCAGGCCTCTGAGCTACGGGCTAAACTCACTGGCTTAGGGGAAAAGCTCACAGACAAAGAAGTGGATGAGCTTTTTAAAGAAGCACATGTTGGACGTGATGGACTTGTTCACTATGAGGAGTTCACTAGAATGGTCACACTTCCTACAGTGGACTACTAGTACTAATGAAGAACAATGAGTCGGGCCCTTATTctcaataatgcatttatttactgctgtgaatgagatattttttttaatcattgtatataaaaaataacaagagTTTAAACTCTACAATAAAAAGTCATATTT

Function

symbol description
calml4a Predicted to enable calcium ion binding activity and enzyme regulator activity. Orthologous to human CALML4 (calmodulin like 4).

GO:

id name namespace
GO:0000226 microtubule cytoskeleton organization biological_process
GO:0019722 calcium-mediated signaling biological_process
GO:0005575 cellular_component cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0030234 enzyme regulator activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081022-9 Predicted to enable calcium ion binding activity and enzyme regulator activity. Orthologous to human CALML4 (calmodulin like 4).

Ensembl:

ensembl_id ENSDARG00000075800

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00066264 False 663 mRNA 0.41 5 34492744 34496196
TCONS_00066265 True 586 mRNA 0.41 5 34492783 34496193

Neighbor

gene id symbol gene type direction distance location
XLOC_033871 cln6a coding upstream 135 34487833 ~ 34492609 (+)
XLOC_033870 NA coding upstream 22450 34453117 ~ 34470294 (+)
XLOC_033869 NA coding upstream 75237 34417066 ~ 34417507 (+)
XLOC_033868 bbox1 coding upstream 177453 34296789 ~ 34315291 (+)
XLOC_033867 fibinb coding upstream 199671 34290051 ~ 34293073 (+)
XLOC_033873 rfx7a coding downstream 10599 34506795 ~ 34546833 (+)
XLOC_033874 fhod1 coding downstream 53002 34549198 ~ 34618314 (+)
XLOC_033875 slc9a5 coding downstream 124222 34620418 ~ 34653251 (+)
XLOC_033876 plekhg4 coding downstream 191773 34687969 ~ 34776900 (+)
XLOC_033877 si:dkey-148a17.5 coding downstream 290395 34786591 ~ 34788033 (+)
XLOC_033866 NA non-coding upstream 204285 34284567 ~ 34288459 (+)
XLOC_033863 NA non-coding upstream 305389 34163775 ~ 34187355 (+)
XLOC_033862 NA non-coding upstream 386534 34102306 ~ 34106210 (+)
XLOC_033880 NA non-coding downstream 327309 34823505 ~ 34828551 (+)
XLOC_033888 NA non-coding downstream 852290 35348486 ~ 35351777 (+)
XLOC_033889 NA non-coding downstream 939050 35435246 ~ 35763213 (+)
XLOC_033890 NA non-coding downstream 1330209 35826405 ~ 35828249 (+)
XLOC_033892 NA non-coding downstream 1875655 36371851 ~ 36392692 (+)

Expression


Co-expression Network