XLOC_033877 (si:dkey-148a17.5)


Basic Information

Item Value
gene id XLOC_033877
gene name si:dkey-148a17.5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 34786591 ~ 34788033 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00066279
AGTCAGAACTGTGATTCTCTGAAACTGGACAACATGAACAGTTCCTCTCTATCTGGTGACACTGACGCAGAGCAGGATGGTTGGTCGACTGCAGGGAGCACTGCTGCCTGTGTGATCCTGGCCGTGTGTTTTCTAGTGGGCACCCCGGGGAACCTGCTGGTGGTGTGGACCATCCTGAAGCATGTAAAACAGCGTTCACACACGGTGCTGCTCATCCTTCATCTGTCCATTGCAGACCTTCTGGTGCTGATCACCTTACCGCTGTGGATCTACTCGCTGGCCCGGTCCTGGGTGTTCGGAAAGGCTGCCTGTAAAGCCATGGTCTACATCATCTATTCCTGCATGTACAGCAGCgtcttcatcatcaccatcatgaGTGTGGAGCGATTCCTGGCTATCAGGTACCCATTCAAGATGCTGTCCTGGAAAAATGAGACGGCCATGTTCAGACTACTGCTAGTGACCTGGATCCTGTCATTAATTTTGGGGATTCCAGTCATCCTGACCCAGTCTttagatgatgaggatgatggcACAGGACACTGCCTGCACCGGGTCTACAACTCCTTGTCTTTTGAAGTCTTTTGTATGTGTTTGGAGACTCTTCTTGGCTTTGTCATTCCATTTTTTACACTTGCGATCTGTTACTGCCAAGTTGCCGCACAGCTCCGAAAGGTGCGCTTCAGGGCCAAGAAGAAATCCGTTTTCCTCATTGGTGGAGTGGTCGTGGCCTTCATTTTGTGTTGGCTACCTCATCATGTCCTTAATGTAATAAGTCTGGTGGATATTCTAAGAGGAGAATCAGAAGAAGCATCTGCTATATCAGATAGCGCTATCTTCATTTTTGGATCTCTTGCTTTTATAAGTAGCTCAGTCAACCCTGTGTTGTACGCTTTTGCTTCCAGAACCTTCCATGGAAGTCTGAAGAAGGCAGGGATAGTGAAGCTGTTTCAAGACTTAGGAACACAAACACTTCAAATGAAAGAAGAGGCCTTGCAGGGTGGTGGACCGCAGGATGGAAATAACCTGGAAAGTCCTGTTGATGAACAGTAGTTAGAAGTTTGGATATATTTGAAATTGTCAAATTTTTCAGATTACATATATTTGGTTTTCTTTTTAGGTAAATAATTGTTTGTTCGAAATGGTCAAAATGGCTTGCATCTTAAATGGCTAAAGCTAGTCAGATGCCATTATATCAtgatttagttttttgtaatCGACAATGTTGAAGTGTTATATTTTACACCTTTGTGCATGTTCTTTAACTGCCACAATATATGTTATAATTAATGTTGTTTAAATGacatgatgttttgttttttcatagtTAAAGGATTTTAGAtgtcaaatattatttcataTCTTTGTGATCAGTTTTGTTCATTTACAATATTACATGATTTTATGAAAGTTGTTTAAATGCCATATTAAATCTGTATATTC

Function

symbol description
si:dkey-148a17.5 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-160728-121 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000103520

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00066279 True 1443 mRNA 0.42 1 34786591 34788033

Neighbor

gene id symbol gene type direction distance location
XLOC_033876 plekhg4 coding upstream 9691 34687969 ~ 34776900 (+)
XLOC_033875 slc9a5 coding upstream 133340 34620418 ~ 34653251 (+)
XLOC_033874 fhod1 coding upstream 168277 34549198 ~ 34618314 (+)
XLOC_033873 rfx7a coding upstream 239758 34506795 ~ 34546833 (+)
XLOC_033872 calml4a coding upstream 290395 34492744 ~ 34496196 (+)
XLOC_033878 si:dkey-148a17.6 coding downstream 1320 34789353 ~ 34791992 (+)
XLOC_033879 esrp2 coding downstream 6796 34794829 ~ 34821836 (+)
XLOC_033880 NA coding downstream 35472 34823505 ~ 34828551 (+)
XLOC_033881 ddx28 coding downstream 175715 34963748 ~ 34965654 (+)
XLOC_033882 zgc:136461 coding downstream 280003 35068036 ~ 35069807 (+)
XLOC_033870 NA non-coding upstream 316297 34453117 ~ 34470294 (+)
XLOC_033869 NA non-coding upstream 369084 34417066 ~ 34417507 (+)
XLOC_033866 NA non-coding upstream 498132 34284567 ~ 34288459 (+)
XLOC_033863 NA non-coding upstream 599236 34163775 ~ 34187355 (+)
XLOC_033862 NA non-coding upstream 680381 34102306 ~ 34106210 (+)
XLOC_033888 NA non-coding downstream 560453 35348486 ~ 35351777 (+)
XLOC_033889 NA non-coding downstream 647213 35435246 ~ 35763213 (+)
XLOC_033890 NA non-coding downstream 1038372 35826405 ~ 35828249 (+)
XLOC_033892 NA non-coding downstream 1583818 36371851 ~ 36392692 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000026_08096241_08097257 NA coding CI01000026 null 8095563 ~ 8097604 (+)