XLOC_033952 (si:dkey-58i8.5)


Basic Information

Item Value
gene id XLOC_033952
gene name si:dkey-58i8.5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 39720317 ~ 39722716 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00066464
ATGTTCCCCTCTTTTGATCAAACCTCAGTAGGAAACATCTCAAGCACTGTTGAGCATCATGACTACCAGCAAGCTCCTAACAGCCTTGAGGTTCCTTCCTCCATCATTGACCTGCAAATACAggaacagtgtgagaatgtggagCTGGAGGAAGAAACTTCTAGTGATGATCAAACTTCAGTGGAGACCATGTCTTCTTTAGAGAGTTATGGTCCTCAGAACACTCCCAACAGTAGTTTTGAGATTCCTCTCTTCGCTGTTGACGAGCAAGTCCTGGAGTTTCCAGATGATCTGTCAGAGGAAGAAACTGTGTGTCCTCTGGCAGAAACCCCAAGCCAAGACATGGTCTTGATTATTGGGAGCATGTGCTGGACCTACAAAATGGGTGAGCTACTGGGAGAAGGAGGATTTGGTGCCGTGTATGCTGGTGTCCGTGCCCATGATGGTCTTCcgGTGGCAATCAAGTTTGCCAAAAAAATGGAGGGCATGGAATATCTCTACGTTCCTGGCCTTCCAGAACTTGTACCACTTGAAATCGGCCTCACACTCATGGCAAACAAGGGTCCCAGCTCACCCAACATAATCGAGCTTCTGGATTGGCAGGAATTTCCAGACCATTACATAATGGTCTTGCAGCGCCCTTCACCATGCCAGAGTGTGTTCAAGCTTTTGGAGAGCTGTGGGAACATCTTTGAAGAAAGGTTTGCTCGGTATATGATGCGCCAGGTCATCAAGGCAGCTGAGACCTGCTGCCGGCGCGGAGTTCTACACAGAGATATAAAGCTGGAGAACTTGATAATCAACACTGAAACCATGGATGTCACCCTGATTGACTTCGGCTGTGGGAACCTGTTCCATGAAACAGAGTACCACACTTTTAGTGGCACAGAGATGTACTGCCCTCCGGAATTTTTCGAGACGGGCAAATACTTTGCACGGCCGGCAACTGTGTATTCGCTTGGAGTGCTGCTATACACTATGGTGTGCGGTTATATGCCAGACCACACGGATCGGGAAAAGATGCAGCACTGGCTGTGGTATCTGCCATCTTTGTCTTGTGAATGCAGCCATCTCATAAATGCCTGTCTGCATCCCGATCCCAGCGAGAGGATAACACTAGAGCAGATCCTCCTTCACGACTGGTTTACGATCACATCATCAGACATGGAGGATGAGCGCCCGGTCCTGGTCATGCAGGAAGAGCTGATTAGCCAGGCATGCTAACACCAGTGGCCTCACCACCTCTCCAGTCCTTTGCTTCTACTATTGTCTGGTGCCAGAGCTTGAGGCAGCAATATTTGCGTCTTGCGGTGTTGCGGCCAAAAATGTATTgttgaattgaaat

Function

symbol description
si:dkey-58i8.5 Predicted to enable ATP binding activity and protein serine/threonine kinase activity. Predicted to act upstream of or within protein phosphorylation.

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0016310 phosphorylation biological_process
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-160728-66 Predicted to enable ATP binding activity and protein serine/threonine kinase activity. Predicted to act upstream of or within protein phosphorylation.

Ensembl:

ensembl_id ENSDARG00000098818

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00066464 True 1345 mRNA 0.49 8 39720317 39722716

Neighbor

gene id symbol gene type direction distance location
XLOC_033951 BX908792.2 coding upstream 6543 39713215 ~ 39713774 (+)
XLOC_033950 ccl36.1 coding upstream 13156 39706004 ~ 39707161 (+)
XLOC_033949 tbc1d14 coding upstream 14554 39679944 ~ 39705763 (+)
XLOC_033948 zgc:158564 coding upstream 41787 39664055 ~ 39678530 (+)
XLOC_033947 ptpn5 coding upstream 59155 39624728 ~ 39661162 (+)
XLOC_033953 tada2b coding downstream 15789 39738505 ~ 39743452 (+)
XLOC_033954 sorcs2 coding downstream 34892 39757608 ~ 40057772 (+)
XLOC_033955 MAF1 coding downstream 358914 40081630 ~ 40092016 (+)
XLOC_033956 si:ch73-174h16.4 coding downstream 370946 40093662 ~ 40102043 (+)
XLOC_033957 esyt2b coding downstream 425497 40148213 ~ 40202225 (+)
XLOC_033931 BX957297.4 non-coding upstream 1041785 38678418 ~ 38678532 (+)
XLOC_033929 BX957297.3 non-coding upstream 1070788 38649136 ~ 38649529 (+)
XLOC_033922 NA non-coding upstream 1373838 38315655 ~ 38346479 (+)
XLOC_033917 BX323797.2 non-coding upstream 1472570 38245927 ~ 38247747 (+)
XLOC_033960 dre-mir-153a non-coding downstream 762794 40485510 ~ 40485590 (+)
XLOC_033963 CU041319.1 non-coding downstream 1147915 40870631 ~ 40870748 (+)
XLOC_033965 NA non-coding downstream 1240012 40962728 ~ 41104337 (+)
XLOC_033966 AL772146.1 non-coding downstream 1390185 41112901 ~ 41113295 (+)
XLOC_033975 BX005319.1 non-coding downstream 1736937 41459653 ~ 41460435 (+)

Expression


Co-expression Network