XLOC_033975 (BX005319.1)


Basic Information

Item Value
gene id XLOC_033975
gene name BX005319.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 41459653 ~ 41460435 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00066520
TTTTTTTCAGAAAGACATATGTTTATCTTTAAAAGATCTTGCagaaaaattgtttttaaaggaaTCATTTACTAtctatgaataaaaaaaagttgaaaaagttAAATGGCACAAATAGGATGTGATTAACATAATATACTGACATATTTACAGATTACTTGTTTAATAATCTATGTTCATCCCCACACATGTGTTGCTGCATATGTTGCTGCAGCTGCAGTGCTTTGCAAATTCCTACAAATGTAATTCATGGTAATAAagctaattacattttttgtttagtaataatttattacattgcATATTAAATTTAATGAGGATTTTACCAAACATGGTGTACCCAAGATGTTAAAGTAGCATAAATATTTTACAGAATTGAACAAAGTACAGAGACACACCAGACGCTCATGTTCTATGTATGTAATGCAATATGAAAGAGATACTCAAAGATGAAGCTGCTCTGAAACACAAGATGAAAAAACACTTCTCTCCAGGAAATACTCATATGATATACAACCAGGATGGCTGGATGGTTATGTGCCAGAACACTCCAAGCCAACGCCAAACAACTAGTGCCGAAGAAAACCACTTTTGTCAGGACCAAAATACTGTGCGAGAACACACCAAACAGACGGCAGCCACCTTAACCAAGAAAGCGAATGTTGCACCTGCATGAGAGGATGCGTCTTTCTGCACCAGCAGGGGGAATTAGTCGTTTTTTTCTTTACACAAATGAAACCAGAAGGTAAAATGGGCACAAAGTGAGTCATTTTCACTTACATC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105738

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00066520 True 783 TEC 0.35 1 41459653 41460435

Neighbor

gene id symbol gene type direction distance location
XLOC_033974 chpf2 coding upstream 25867 41421998 ~ 41433786 (+)
XLOC_033973 garem coding upstream 109255 41340520 ~ 41350398 (+)
XLOC_033972 dph2 coding upstream 128687 41322407 ~ 41330966 (+)
XLOC_033971 MCUR1 coding upstream 141439 41313568 ~ 41318214 (+)
XLOC_033970 rgs9bp coding upstream 147456 41303572 ~ 41312197 (+)
XLOC_033976 BX005319.2 coding downstream 122109 41582544 ~ 41582659 (+)
XLOC_033977 hrh3 coding downstream 288258 41748693 ~ 41753237 (+)
XLOC_033978 AL928906.1 coding downstream 300826 41761261 ~ 41761379 (+)
XLOC_033979 orc6 coding downstream 351755 41812190 ~ 41826318 (+)
XLOC_033980 gpt2 coding downstream 426994 41887429 ~ 41901688 (+)
XLOC_033966 AL772146.1 non-coding upstream 346358 41112901 ~ 41113295 (+)
XLOC_033965 NA non-coding upstream 355316 40962728 ~ 41104337 (+)
XLOC_033963 CU041319.1 non-coding upstream 588905 40870631 ~ 40870748 (+)
XLOC_033960 dre-mir-153a non-coding upstream 974063 40485510 ~ 40485590 (+)
XLOC_033951 BX908792.2 non-coding upstream 1745879 39713215 ~ 39713774 (+)
XLOC_033982 CU570782.3 non-coding downstream 853339 42313774 ~ 42313888 (+)
XLOC_033983 NA non-coding downstream 907004 42367439 ~ 42393494 (+)
XLOC_033985 NA non-coding downstream 1091751 42552186 ~ 42849712 (+)

Expression


Co-expression Network