XLOC_033963 (CU041319.1)


Basic Information

Item Value
gene id XLOC_033963
gene name CU041319.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 40870631 ~ 40870748 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00066484
TCTACACAgcaatatcaccctgcagcctaagACTATTTActaactgaagctaagcagggctgagcctggtcagtacctggatgggagaccacatgggaaaactaggtttctGGTGGAt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000081069

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00066484 True 118 rRNA 0.48 1 40870631 40870748

Neighbor

gene id symbol gene type direction distance location
XLOC_033962 lmbr1 coding upstream 162491 40658003 ~ 40708140 (+)
XLOC_033961 mnx1 coding upstream 229625 40638210 ~ 40641006 (+)
XLOC_033959 ptprn2 coding upstream 371245 40228422 ~ 40499386 (+)
XLOC_033960 dre-mir-153a coding upstream 385041 40485510 ~ 40485590 (+)
XLOC_033958 ncapg2 coding upstream 643029 40205394 ~ 40227602 (+)
XLOC_033964 shha coding downstream 13264 40884012 ~ 40893295 (+)
XLOC_033965 NA coding downstream 91980 40962728 ~ 41104337 (+)
XLOC_033966 AL772146.1 coding downstream 242153 41112901 ~ 41113295 (+)
XLOC_033967 puf60b coding downstream 275812 41146560 ~ 41158143 (+)
XLOC_033968 scrib coding downstream 289477 41160225 ~ 41275897 (+)
XLOC_033951 BX908792.2 non-coding upstream 1156857 39713215 ~ 39713774 (+)
XLOC_033931 BX957297.4 non-coding upstream 2192099 38678418 ~ 38678532 (+)
XLOC_033929 BX957297.3 non-coding upstream 2221102 38649136 ~ 38649529 (+)
XLOC_033922 NA non-coding upstream 2524152 38315655 ~ 38346479 (+)
XLOC_033975 BX005319.1 non-coding downstream 588905 41459653 ~ 41460435 (+)
XLOC_033976 BX005319.2 non-coding downstream 711796 41582544 ~ 41582659 (+)
XLOC_033978 AL928906.1 non-coding downstream 890513 41761261 ~ 41761379 (+)

Expression


Co-expression Network