XLOC_033971 (MCUR1)


Basic Information

Item Value
gene id XLOC_033971
gene name MCUR1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 41313568 ~ 41318214 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00066513
AACGTCATTGTTTACGATTTCAGTTACAGGAAGTTTAACTAAAGGTGATCggatctgttaaacagaaagaaAAGCAAGTTAACTTTACATTCTTGTTTTAGAGTAAAGAATAATGTGTGATTGGTTGAGTTCTATGTTTAAGAAGTCTTTTTTAATGTATTGACTTTTGAAGACGATCGAAGAAGATCATGAGGTCAGATCAGGACTCGTACCGTCGAGATCCTCCAACATTTTAAAGTTCGTTCACTTGATCATATAGTTTATCAAGTGGTTAAGTCAAGGCTTCAGCAGAATGAGGTGTCCACACGGCAGACATCTGATCGCCGGCATCAGCGCATTTAACGGAATAAGACCTAATCGGTCTGCTCTTCTGCTGCCGAGAGTTTCACACAGGGTGTTCAGAGAGTTGAGCACTTCAGCTCAAGCTCTACAGTATGATGTGAAAAGATCCGACATGGCCAAGTCTGGCAATAGGAAGTTATTCTTCGACACTCATGCAATGGTCCAGCTGCTCGAGGAAAGCGGTTTCATGACCCAGCAGGCAGAGGTCATAGTCAAAATGATGGTAAATATCACTAACTCAAACATGGATATTATGTACAGTGACATGGCTACCAAGACACAGCAGGAAATCATGTTGCAGAAAGTCATGTCTCATATTGCTGCTGTGAAAAAGGACATGATCATTCTGGAGAAGAGTGAATTCTCTGCACTACTGGCGGAGAATGAGAAAATCAAGGTTGAGCTGTTACAGCTTAGGATACAACTCGCAGATGTAATAAACAAAAGGCGAGCAGATATCATTTTGGATCTGAACATAGAAAAAAGCCGTGTAAAGGAGATGTGGGCAGACTTTAACAGAAAACTTATTGGGACCAGGAATGAACTGTTGGAAATGAATTCTGAGCAGGATCGTCATGTGACACAGACCAACATGAAAATCGACACAGAAGTGGCTGGCCTGAAGACCATGCTGGAGGCACACAAACTGGACACTATCAAATATCTTGCAGGTTCTGTGTTCACATGTCTCACAGTTATACTTGGATTCTATCGGATATGGATGTGAACATCAGAAGACTTTATTCTTCCTGACAAAACATCTCATCAACCTTGGTTCATTAGAAGAGCTGTGGTATTCATCGTTATTATGTTGGAGCAAATATCTGTTCATGCTTTATTGTGATGtcaagtttaattaaaaaaaacaaacatgttatgGACAAAAACACTTGAAAATATTTTGGGATTCAAGCAGCTACATACACAATCAATTGGCTTTGTAGTCAATTATGGTTATGCATCAGATCATTTCACATGCAATAAAATGATGTTGCTTAAATACACTGCATATCGAATCAAGAACACGAGAgatcacttttttaaataaataattacatagtAAATACTTAGGCAT
>TCONS_00066514
ATGATCATTCTGGAGAAGAGTGAATTCTCTGCACTACTGGCGGAGAATGAGAAAATCAAGGTTGAGCTGTTACAGCTTAGGATACAACTCGCAGATGTAATAAACAAAAGGCGAGCAGATATCATTTTGGATCTGAACATAGAAAAAAGCCGTGTAAAGGAGATGTGGGCAGACTTTAACAGAAAACTTATTGGGACCAGGAATGAACTGTTGGAAATGAATTCTGAGCAGGATCGTCATGTGACACAGACCAACATGAAAATCGACACAGAAGTGGCTGGCCTGAAGACCATGCTGGAGGCACACAAACTGGACACTATCAAATATCTTGCAGGTTCTGTGTTCACATGTCTCACAGTTATACTTGGATTCTATCGGATATGGATGTGAACATCAGAAGACTTTATTCTTCCTGACAAAACATCTCATCAACCTTGGTTCATTAGAAGAGCTGTGGTATTCATCGTTATTATGTTGGAGCAAATATCTGTTCATGCTTTATTGTGATGtcaagtttaattaaaaaaaacaaacatgttatgGACAAAAACACTTGAAAATATTTTGGGATTCAAGCAGCTACATACACAATCAATTGGCTTTGTAGTCAATTATGGTTATGCATCAGATCATTTCACATGCAATAAAATGATGTTGCTTAAATACACTGCATATCGAATCAAGAACACGAGAgatcacttttttaaataaataattacatagt

Function

symbol description
mcur1 Involved in calcium import into the mitochondrion and positive regulation of mitochondrial calcium ion concentration. Is integral component of mitochondrial inner membrane.

GO: NA

KEGG:

id description
ko03029 Mitochondrial biogenesis

Ensembl:

ensembl_id ENSDARG00000016964

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00066513 False 1417 mRNA 0.39 9 41313568 41318214
TCONS_00066514 True 724 mRNA 0.37 6 41314862 41318200

Neighbor

gene id symbol gene type direction distance location
XLOC_033970 rgs9bp coding upstream 1371 41303572 ~ 41312197 (+)
XLOC_033969 si:dkey-86l18.10 coding upstream 10708 41295974 ~ 41302860 (+)
XLOC_033968 scrib coding upstream 37671 41160225 ~ 41275897 (+)
XLOC_033967 puf60b coding upstream 155425 41146560 ~ 41158143 (+)
XLOC_033966 AL772146.1 coding upstream 200273 41112901 ~ 41113295 (+)
XLOC_033972 dph2 coding downstream 4193 41322407 ~ 41330966 (+)
XLOC_033973 garem coding downstream 22306 41340520 ~ 41350398 (+)
XLOC_033974 chpf2 coding downstream 103784 41421998 ~ 41433786 (+)
XLOC_033975 BX005319.1 coding downstream 141439 41459653 ~ 41460435 (+)
XLOC_033976 BX005319.2 coding downstream 264330 41582544 ~ 41582659 (+)
XLOC_033965 NA non-coding upstream 209231 40962728 ~ 41104337 (+)
XLOC_033963 CU041319.1 non-coding upstream 442820 40870631 ~ 40870748 (+)
XLOC_033960 dre-mir-153a non-coding upstream 827978 40485510 ~ 40485590 (+)
XLOC_033951 BX908792.2 non-coding upstream 1599794 39713215 ~ 39713774 (+)
XLOC_033978 AL928906.1 non-coding downstream 443047 41761261 ~ 41761379 (+)
XLOC_033982 CU570782.3 non-coding downstream 995560 42313774 ~ 42313888 (+)
XLOC_033983 NA non-coding downstream 1049225 42367439 ~ 42393494 (+)

Expression


Co-expression Network